RNA–Protein interactions for RNA: ENST00000538970.5

VAMP1-206, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 1 (best)

Gene VAMP1, Length 567 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-206ENST00000538970 CITED2Q99967 270 aaPredicted RBP10.06□□□□□ -0.8
VAMP1-206ENST00000538970 CHST6Q9GZX3 395 aa10.06□□□□□ -0.8
VAMP1-206ENST00000538970 RBFOX1Q9NWB1 397 aaKnown RBP10.06□□□□□ -0.8
VAMP1-206ENST00000538970 HILPDAQ9Y5L2 63 aa10.06□□□□□ -0.8
VAMP1-206ENST00000538970 SESN1Q9Y6P5 492 aa10.06□□□□□ -0.8
VAMP1-206ENST00000538970 MINOS1-NBL1R4GNA1 71 aa10.06□□□□□ -0.8
VAMP1-206ENST00000538970 TRBV2A0A0J9YWF9 115 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 PIN1P1O15428 100 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 XPNPEP2O43895 674 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 PSPNO60542 156 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 SERPINA3P01011 423 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 UBCP0CG48 685 aaKnown RBP10.05□□□□□ -0.8
VAMP1-206ENST00000538970 GABRR1P24046 479 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 FASP25445 335 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 PEX2P28328 305 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 POLR2IP36954 125 aaKnown RBP10.05□□□□□ -0.8
VAMP1-206ENST00000538970 KIR3DL2P43630 455 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 BLCAPP62952 87 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 EMX1Q04741 257 aaPredicted RBP10.05□□□□□ -0.8
VAMP1-206ENST00000538970 SLC34A1Q06495 639 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 GRK1Q15835 563 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 TMEM95Q3KNT9 176 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 OXLD1Q5BKU9 147 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 Q6ZS46 218 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 ENTHD1Q8IYW4 607 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 DNAAF1Q8NEP3 725 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 OR4F17Q8NGA8 305 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 BCAS4Q8TDM0 211 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 PP6455Q8WZ26 134 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 RNF166Q96A37 237 aaPredicted RBP10.05□□□□□ -0.8
VAMP1-206ENST00000538970 R3HDM4Q96D70 268 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 OR4F4Q96R69 305 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 OR5M11Q96RB7 305 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 ADI1Q9BV57 179 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 GABARAPL3Q9BY60 117 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 TMEM133Q9H2Q1 129 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 DNAH3Q8TD57 4116 aa10.05□□□□□ -0.8
VAMP1-206ENST00000538970 IGKV1-9A0A0C4DH69 117 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 FAM90A22PA8MWA6 464 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 ENTPD6O75354 484 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 PEX14O75381 377 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 MMP23AO75900 390 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 ALDOBP05062 364 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 BCL3P20749 454 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 AZGP1P25311 298 aaKnown RBP10.04□□□□□ -0.8
VAMP1-206ENST00000538970 DUSP1P28562 367 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 VDAC2P45880 294 aaPredicted RBP10.04□□□□□ -0.8
VAMP1-206ENST00000538970 OR3A1P47881 315 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 NPBWR2P48146 333 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 POU3F4P49335 361 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 RBP2P50120 134 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 ATP1B3P54709 279 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 P2RX3P56373 397 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 ZNF85Q03923 595 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 TMED1Q13445 227 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 ZNF146Q15072 292 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 TP53I3Q53FA7 332 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 ARSJQ5FYB0 599 aaPredicted RBP10.04□□□□□ -0.8
VAMP1-206ENST00000538970 SPIN3Q5JUX0 258 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 ZBTB49Q6ZSB9 765 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 FAM220AQ7Z4H9 259 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 AMIGO2Q86SJ2 522 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 RDH10Q8IZV5 341 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 FAM58AQ8N1B3 248 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 OR4P4Q8NGL7 312 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 OR8J1Q8NGP2 316 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 NDNFQ8TB73 568 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 EME1Q96AY2 570 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 ADAT3Q96EY9 351 aaPredicted RBP10.04□□□□□ -0.8
VAMP1-206ENST00000538970 CLEC7AQ9BXN2 247 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP10.04□□□□□ -0.8
VAMP1-206ENST00000538970 GNG8Q9UK08 70 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 PLXNB1O43157 2135 aa10.04□□□□□ -0.8
VAMP1-206ENST00000538970 MGST3O14880 152 aa10.03□□□□□ -0.8
VAMP1-206ENST00000538970 CALCBP10092 127 aa10.03□□□□□ -0.8
VAMP1-206ENST00000538970 FCGR1AP12314 374 aa10.03□□□□□ -0.8
VAMP1-206ENST00000538970 PRKACAP17612 351 aa10.03□□□□□ -0.8
VAMP1-206ENST00000538970 HTR1DP28221 377 aa10.03□□□□□ -0.8
VAMP1-206ENST00000538970 ERP29P30040 261 aaKnown RBP10.03□□□□□ -0.8
VAMP1-206ENST00000538970 ATP6V1E1P36543 226 aa10.03□□□□□ -0.8
VAMP1-206ENST00000538970 SNU13P55769 128 aaKnown RBP10.03□□□□□ -0.8
VAMP1-206ENST00000538970 IL18R1Q13478 541 aa10.03□□□□□ -0.8
VAMP1-206ENST00000538970 PHF21AQ96BD5 680 aa10.03□□□□□ -0.8
VAMP1-206ENST00000538970 OCSTAMPQ9BR26 566 aa10.03□□□□□ -0.8
VAMP1-206ENST00000538970 RIBC2Q9H4K1 309 aa10.03□□□□□ -0.8
VAMP1-206ENST00000538970 NECAP2Q9NVZ3 263 aa10.03□□□□□ -0.8
VAMP1-206ENST00000538970 UBE2J1Q9Y385 318 aaPredicted RBP10.03□□□□□ -0.8
VAMP1-206ENST00000538970 AP4S1Q9Y587 144 aa10.03□□□□□ -0.8
VAMP1-206ENST00000538970 DSCAML1Q8TD84 2053 aa10.02□□□□□ -0.81
VAMP1-206ENST00000538970 IGKV1-12A0A0C4DH73 117 aa10.02□□□□□ -0.81
VAMP1-206ENST00000538970 SIRPB1O00241 398 aa10.02□□□□□ -0.81
VAMP1-206ENST00000538970 CYB5AP00167 134 aa10.02□□□□□ -0.81
VAMP1-206ENST00000538970 IGKV1D-12P01611 117 aa10.02□□□□□ -0.81
VAMP1-206ENST00000538970 ATF1P18846 271 aa10.02□□□□□ -0.81
VAMP1-206ENST00000538970 PRKACBP22694 351 aa10.02□□□□□ -0.81
VAMP1-206ENST00000538970 MTCP1P56278 107 aa10.02□□□□□ -0.81
VAMP1-206ENST00000538970 CDC42P60953 191 aa10.02□□□□□ -0.81
VAMP1-206ENST00000538970 BNIP1Q12981 228 aa10.02□□□□□ -0.81
VAMP1-206ENST00000538970 PRAMEF5Q5TYX0 476 aa10.02□□□□□ -0.81
VAMP1-206ENST00000538970 TMEM244Q5VVB8 128 aa10.02□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms