RNA–Protein interactions for RNA: ENST00000538933.1

CLSTN3-208, Transcript of calsyntenin 3, humanhuman

TSL 3

Gene CLSTN3, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-208ENST00000538933 SHISA3A0PJX4 238 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 NOTOA8MTQ0 251 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 TIMM23O14925 209 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 TSPAN15O95858 294 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 TMEM225BP0DP42 221 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 IRF2P14316 349 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 HTR2CP28335 458 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 RPS19P39019 145 aaKnown RBP10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 CAV3P56539 151 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 OR10A3P58181 314 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 DGUOKQ16854 277 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 BEAN1Q3B7T3 259 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 FAM209AQ5JX71 171 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 IDNKQ5T6J7 187 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 KPRPQ5T749 579 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 AWAT2Q6E213 333 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 ZNF529Q6P280 563 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 HAGHLQ6PII5 290 aaPredicted RBP10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 KRT74Q7RTS7 529 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 CDH26Q8IXH8 852 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 MKXQ8IYA7 352 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 OR6M1Q8NGM8 313 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 OR11L1Q8NGX0 322 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 TNFAIP8L1Q8WVP5 186 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 ITLN1Q8WWA0 313 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 AP3S1Q92572 193 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 UQCC2Q9BRT2 126 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 FN3KRPQ9HA64 309 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 SAP30LQ9HAJ7 183 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 BEX1Q9HBH7 125 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 UFSP2Q9NUQ7 469 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 IL19Q9UHD0 177 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 DAPK2Q9UIK4 370 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 ING4Q9UNL4 249 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 BIRC6Q9NR09 4857 aa10.39□□□□□ -0.75
CLSTN3-208ENST00000538933 IGHV1-69-2A0A0G2JMI3 117 aa10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 PQLC2LA1A4F0 135 aa10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 TRAPPC2LH3BP13 241 aa10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 CD200P41217 278 aa10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 PRAMEF6Q5VXH4 476 aa10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 FOXB2Q5VYV0 432 aa10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 OLFML2AQ68BL7 652 aa10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 SFXN4Q6P4A7 337 aa10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 BRICD5Q6PL45 260 aa10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 C9orf139Q6ZV77 190 aa10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 SLC25A46Q96AG3 418 aa10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 MEGF10Q96KG7 1140 aa10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 NKX3-1Q99801 234 aaPredicted RBP10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 STEAP1Q9UHE8 339 aa10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 MRPS28Q9Y2Q9 187 aaKnown RBP10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 POLDIP2Q9Y2S7 368 aa10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 POLR3KQ9Y2Y1 108 aaPredicted RBP10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 DNAH9Q9NYC9 4486 aa10.38□□□□□ -0.75
CLSTN3-208ENST00000538933 FAM181BA6NEQ2 426 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 IFITM5A6NNB3 132 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 J3QT63 122 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 AIPO00170 330 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 CSTBP04080 98 aaKnown RBP10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 CD55P08174 381 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 ADH4P08319 380 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 VSIG8P0DPA2 414 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 OR3A4PP47883 348 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 CAPZA1P52907 286 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 RAG2P55895 527 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 ZNF154Q13106 437 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 P2RY14Q15391 338 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 RSU1Q15404 277 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 MZT2AQ6P582 158 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 SLC25A26Q70HW3 274 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 MOGAT3Q86VF5 341 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 ANGPTL5Q86XS5 388 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 CELF2-AS1Q8N7Q2 184 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 SCCPDHQ8NBX0 429 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 OR4F5Q8NH21 305 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 METTL9Q9H1A3 318 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 PRDM13Q9H4Q3 707 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 CNTD2Q9H8S5 307 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 SMURF1Q9HCE7 757 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 PCDHB16Q9NRJ7 776 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 C1orf123Q9NWV4 160 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 C1RLQ9NZP8 487 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 CCDC59Q9P031 241 aaKnown RBP10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 NOTCH3Q9UM47 2321 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 AUP1Q9Y679 476 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 DOCK11Q5JSL3 2073 aa10.37□□□□□ -0.75
CLSTN3-208ENST00000538933 IGKV1-27A0A075B6S5 117 aa10.36□□□□□ -0.75
CLSTN3-208ENST00000538933 CLPSL1A2RUU4 121 aa10.36□□□□□ -0.75
CLSTN3-208ENST00000538933 LRRC30A6NM36 301 aa10.36□□□□□ -0.75
CLSTN3-208ENST00000538933 CLDN25C9JDP6 229 aa10.36□□□□□ -0.75
CLSTN3-208ENST00000538933 G3V4G9 280 aa10.36□□□□□ -0.75
CLSTN3-208ENST00000538933 SLC17A2O00624 439 aa10.36□□□□□ -0.75
CLSTN3-208ENST00000538933 CDIPTO14735 213 aa10.36□□□□□ -0.75
CLSTN3-208ENST00000538933 TMEM127O75204 238 aa10.36□□□□□ -0.75
CLSTN3-208ENST00000538933 NDUFA7O95182 113 aa10.36□□□□□ -0.75
CLSTN3-208ENST00000538933 PRB2P02812 416 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-208ENST00000538933 UBBP0CG47 229 aa10.36□□□□□ -0.75
CLSTN3-208ENST00000538933 SLC2A2P11168 524 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-208ENST00000538933 ARSBP15848 533 aa10.36□□□□□ -0.75
CLSTN3-208ENST00000538933 ZNF182P17025 639 aaPredicted RBP10.36□□□□□ -0.75
CLSTN3-208ENST00000538933 RBMXP38159 391 aaKnown RBP10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms