RNA–Protein interactions for RNA: ENST00000538492.5

RAB40C-204, Transcript of RAB40C, member RAS oncogene family, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RAB40C, Length 2,569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-204ENST00000538492 PIGMQ9H3S5 423 aa21.48■■□□□ 1.03
RAB40C-204ENST00000538492 ZC4H2Q9NQZ6 224 aa21.48■■□□□ 1.03
RAB40C-204ENST00000538492 ZNF629Q9UEG4 869 aaPredicted RBP21.48■■□□□ 1.03
RAB40C-204ENST00000538492 CDX4O14627 284 aaPredicted RBP21.48■■□□□ 1.03
RAB40C-204ENST00000538492 FGF16O43320 207 aa21.48■■□□□ 1.03
RAB40C-204ENST00000538492 CD79AP11912 226 aa21.48■■□□□ 1.03
RAB40C-204ENST00000538492 TAGLNQ01995 201 aaKnown RBP21.48■■□□□ 1.03
RAB40C-204ENST00000538492 GGNBP1Q5YKI7 109 aa21.48■■□□□ 1.03
RAB40C-204ENST00000538492 DHRS13Q6UX07 377 aa21.48■■□□□ 1.03
RAB40C-204ENST00000538492 TFAP2EQ6VUC0 442 aa21.48■■□□□ 1.03
RAB40C-204ENST00000538492 URB1O60287 2271 aaKnown RBP21.48■■□□□ 1.03
RAB40C-204ENST00000538492 M0R296 226 aa21.47■■□□□ 1.03
RAB40C-204ENST00000538492 DAZAP2Q15038 168 aaPredicted RBP21.47■■□□□ 1.03
RAB40C-204ENST00000538492 ADAMTS17Q8TE56 1095 aa21.47■■□□□ 1.03
RAB40C-204ENST00000538492 MT-CO3P00414 261 aa21.47■■□□□ 1.03
RAB40C-204ENST00000538492 OR5AC1P0C628 307 aa21.47■■□□□ 1.03
RAB40C-204ENST00000538492 OR2A2Q6IF42 318 aa21.47■■□□□ 1.03
RAB40C-204ENST00000538492 RTN4IP1Q8WWV3 396 aaPredicted RBP21.47■■□□□ 1.03
RAB40C-204ENST00000538492 ZNF286AQ9HBT8 521 aa21.47■■□□□ 1.03
RAB40C-204ENST00000538492 KMT2EQ8IZD2 1858 aa21.47■■□□□ 1.03
RAB40C-204ENST00000538492 SMUG1Q53HV7 270 aa21.46■■□□□ 1.03
RAB40C-204ENST00000538492 RNF141Q8WVD5 230 aa21.46■■□□□ 1.03
RAB40C-204ENST00000538492 CNTNAP3BQ96NU0 1288 aa21.46■■□□□ 1.03
RAB40C-204ENST00000538492 TECTBQ96PL2 329 aa21.46■■□□□ 1.03
RAB40C-204ENST00000538492 CNTNAP3Q9BZ76 1288 aa21.46■■□□□ 1.03
RAB40C-204ENST00000538492 C12orf4Q9NQ89 552 aa21.46■■□□□ 1.03
RAB40C-204ENST00000538492 SCGB1D2O95969 90 aa21.46■■□□□ 1.03
RAB40C-204ENST00000538492 IFNA21P01568 189 aa21.46■■□□□ 1.03
RAB40C-204ENST00000538492 ATF4P18848 351 aaPredicted RBP21.46■■□□□ 1.03
RAB40C-204ENST00000538492 GPM6AP51674 278 aa21.46■■□□□ 1.03
RAB40C-204ENST00000538492 SPEM2Q0P670 501 aa21.46■■□□□ 1.03
RAB40C-204ENST00000538492 PRDX4Q13162 271 aa21.46■■□□□ 1.03
RAB40C-204ENST00000538492 SLAMF9Q96A28 289 aa21.46■■□□□ 1.03
RAB40C-204ENST00000538492 LRRC46Q96FV0 321 aa21.46■■□□□ 1.03
RAB40C-204ENST00000538492 REPIN1Q9BWE0 567 aaKnown RBP21.46■■□□□ 1.03
RAB40C-204ENST00000538492 LDAHQ9H6V9 325 aa21.46■■□□□ 1.03
RAB40C-204ENST00000538492 DNAJB11Q9UBS4 358 aa21.46■■□□□ 1.03
RAB40C-204ENST00000538492 GLS2Q9UI32 602 aa21.46■■□□□ 1.03
RAB40C-204ENST00000538492 LSM5Q9Y4Y9 91 aaKnown RBP21.46■■□□□ 1.03
RAB40C-204ENST00000538492 HKR1P10072 659 aa21.45■■□□□ 1.03
RAB40C-204ENST00000538492 FUT3P21217 361 aa21.45■■□□□ 1.03
RAB40C-204ENST00000538492 CCDC36Q8IYA8 594 aa21.45■■□□□ 1.03
RAB40C-204ENST00000538492 OR5L1Q8NGL2 311 aa21.45■■□□□ 1.03
RAB40C-204ENST00000538492 APH1AQ96BI3 265 aa21.45■■□□□ 1.03
RAB40C-204ENST00000538492 FGF23Q9GZV9 251 aaPredicted RBP21.45■■□□□ 1.03
RAB40C-204ENST00000538492 KCNIP3Q9Y2W7 256 aa21.45■■□□□ 1.03
RAB40C-204ENST00000538492 BCL3P20749 454 aa21.45■■□□□ 1.02
RAB40C-204ENST00000538492 HAAOP46952 286 aa21.45■■□□□ 1.02
RAB40C-204ENST00000538492 RPL7L1Q6DKI1 246 aaKnown RBP21.45■■□□□ 1.02
RAB40C-204ENST00000538492 NAA60Q9H7X0 242 aa21.45■■□□□ 1.02
RAB40C-204ENST00000538492 PCDHB16Q9NRJ7 776 aa21.45■■□□□ 1.02
RAB40C-204ENST00000538492 TMEM100Q9NV29 134 aa21.45■■□□□ 1.02
RAB40C-204ENST00000538492 PRRC2CQ9Y520 2896 aaKnown RBP21.44■■□□□ 1.02
RAB40C-204ENST00000538492 NGFP01138 241 aa21.44■■□□□ 1.02
RAB40C-204ENST00000538492 MRPL21Q7Z2W9 205 aaKnown RBP21.44■■□□□ 1.02
RAB40C-204ENST00000538492 OR11L1Q8NGX0 322 aa21.44■■□□□ 1.02
RAB40C-204ENST00000538492 SLC2A9Q9NRM0 540 aa21.44■■□□□ 1.02
RAB40C-204ENST00000538492 RPL36A-HNRNPH2H7BZ11 118 aa21.44■■□□□ 1.02
RAB40C-204ENST00000538492 RCC1P18754 421 aaPredicted RBP21.44■■□□□ 1.02
RAB40C-204ENST00000538492 SPINK2P20155 84 aa21.44■■□□□ 1.02
RAB40C-204ENST00000538492 HS3ST6Q96QI5 342 aa21.44■■□□□ 1.02
RAB40C-204ENST00000538492 TNFSF15O95150 251 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 FAM157CP0CG43 387 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 MEOX1P50221 254 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 RAB1AP62820 205 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 PLA2G2CQ5R387 149 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 C5orf24Q7Z6I8 188 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 OR5T2Q8NGG2 359 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 HPSE2Q8WWQ2 592 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 ATPIF1Q9UII2 106 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 PQLC2LA1A4F0 135 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 ZNF705EA8MWA4 302 aaPredicted RBP21.43■■□□□ 1.02
RAB40C-204ENST00000538492 ACTL6AO96019 429 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 RPL12P30050 165 aaKnown RBP21.43■■□□□ 1.02
RAB40C-204ENST00000538492 TMEM187Q14656 261 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 NUFIP2Q7Z417 695 aaKnown RBP21.43■■□□□ 1.02
RAB40C-204ENST00000538492 TUBD1Q9UJT1 453 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 STARD10Q9Y365 291 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 R4GN57 208 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 K7EPK0 472 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 ZNF273Q14593 569 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 STK11Q15831 433 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 IGSF11Q5DX21 431 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 ATP1A1-AS1Q5TC04 95 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 LYZL2Q7Z4W2 148 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 FAM71E2Q8N5Q1 922 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 IL36RNQ9UBH0 155 aa21.43■■□□□ 1.02
RAB40C-204ENST00000538492 DEDDO75618 318 aa21.42■■□□□ 1.02
RAB40C-204ENST00000538492 SMCO1Q147U7 214 aa21.42■■□□□ 1.02
RAB40C-204ENST00000538492 C12orf49Q9H741 205 aa21.42■■□□□ 1.02
RAB40C-204ENST00000538492 LIPGQ9Y5X9 500 aa21.42■■□□□ 1.02
RAB40C-204ENST00000538492 SP1P08047 785 aa21.42■■□□□ 1.02
RAB40C-204ENST00000538492 AADACP22760 399 aa21.42■■□□□ 1.02
RAB40C-204ENST00000538492 SRSF3P84103 164 aaKnown RBP21.42■■□□□ 1.02
RAB40C-204ENST00000538492 SMIM3Q9BZL3 60 aa21.42■■□□□ 1.02
RAB40C-204ENST00000538492 TAF9BQ9HBM6 251 aa21.42■■□□□ 1.02
RAB40C-204ENST00000538492 RAB19A4D1S5 217 aa21.41■■□□□ 1.02
RAB40C-204ENST00000538492 HSPB6O14558 160 aa21.41■■□□□ 1.02
RAB40C-204ENST00000538492 BET1O15155 118 aa21.41■■□□□ 1.02
RAB40C-204ENST00000538492 HES3Q5TGS1 186 aa21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms