RNA–Protein interactions for RNA: ENST00000537706.5

USP28-205, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 1 (best) BASIC

Gene USP28, Length 1,900 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-205ENST00000537706 GASTP01350 101 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 RPLP1P05386 114 aaKnown RBP7.17□□□□□ -1.26
USP28-205ENST00000537706 ELANEP08246 267 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 FAM106CPP0CH98 169 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 OSMP13725 252 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 ARSBP15848 533 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 FSTP19883 344 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 CD24P25063 80 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 MNDAP41218 407 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 CRISP1P54107 249 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 FOXE3Q13461 319 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 TBCEQ15813 527 aaPredicted RBP7.17□□□□□ -1.26
USP28-205ENST00000537706 GLYATL3Q5SZD4 288 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 SYT6Q5T7P8 510 aaPredicted RBP7.17□□□□□ -1.26
USP28-205ENST00000537706 OTPQ5XKR4 325 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 SLC16A12Q6ZSM3 486 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 LINC00336Q6ZUF6 198 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 WDR86Q86TI4 376 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 RBM45Q8IUH3 476 aaKnown RBP7.17□□□□□ -1.26
USP28-205ENST00000537706 STPG2Q8N412 459 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 FTMTQ8N4E7 242 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 OR4M1Q8NGD0 313 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 OR2AE1Q8NHA4 323 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 TMEM255BQ8WV15 326 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 FNDC11Q9BVV2 318 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 FUNDC2Q9BWH2 189 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 AASSQ9UDR5 926 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 WARS2Q9UGM6 360 aaKnown RBP7.17□□□□□ -1.26
USP28-205ENST00000537706 PSORS1C1Q9UIG5 152 aa7.17□□□□□ -1.26
USP28-205ENST00000537706 DEDDO75618 318 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 INMTO95050 263 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 FADS2O95864 444 aaKnown RBP7.16□□□□□ -1.26
USP28-205ENST00000537706 AMY1AP04745 511 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 AMY2AP04746 511 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 ZNF728P0DKX0 622 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 PSG2P11465 335 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 CRABP1P29762 137 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 IFNA8P32881 189 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 GPR50Q13585 617 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 FHL3Q13643 280 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 ZNF273Q14593 569 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 PTGES3Q15185 160 aaKnown RBP7.16□□□□□ -1.26
USP28-205ENST00000537706 UBE2UQ5VVX9 321 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 SLX4IPQ5VYV7 408 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 ACSM6Q6P461 480 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 CORO6Q6QEF8 472 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 CD300LDQ6UXZ3 194 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 NAA40Q86UY6 237 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 ANKRD13BQ86YJ7 626 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 OR6V1Q8N148 313 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 ZNF561Q8N587 486 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 COPS4Q9BT78 406 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 DCUN1D5Q9BTE7 237 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 CLEC7AQ9BXN2 247 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 ANKRD19PQ9H560 264 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 ACOT13Q9NPJ3 140 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 DPM3Q9P2X0 92 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 LHFPL6Q9Y693 200 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 HECTD4Q9Y4D8 3996 aa7.16□□□□□ -1.26
USP28-205ENST00000537706 CSMD3Q7Z407 3707 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 IGKV1D-17A0A075B6S4 117 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 IFI30P13284 250 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 CEACAM3P40198 252 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 MAP2K4P45985 399 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 SNRPGP62308 76 aaKnown RBP7.15□□□□□ -1.26
USP28-205ENST00000537706 ACTA2P62736 377 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 ACTG2P63267 376 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 ACTC1P68032 377 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 ACTA1P68133 377 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 ZNF616Q08AN1 781 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 PIN1Q13526 163 aaPredicted RBP7.15□□□□□ -1.26
USP28-205ENST00000537706 TIGD6Q17RP2 521 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 RSPO1Q2MKA7 263 aaPredicted RBP7.15□□□□□ -1.26
USP28-205ENST00000537706 LDLRAD2Q5SZI1 272 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 C12orf73Q69YU5 71 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 CCDC144NLQ6NUI1 221 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 DRAM2Q6UX65 266 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 OAFQ86UD1 273 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 NKAIN4Q8IVV8 208 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 LRRC75AQ8NAA5 344 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 CSNK2A3Q8NEV1 391 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 OR1N2Q8NGR9 330 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 OR51A7Q8NH64 312 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 ZNF671Q8TAW3 534 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 RPL3LQ92901 407 aaKnown RBP7.15□□□□□ -1.26
USP28-205ENST00000537706 CREB3L1Q96BA8 519 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 BPIFA2Q96DR5 249 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 YIPF6Q96EC8 236 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 OR4C12Q96R67 309 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 PAPOLGQ9BWT3 736 aaKnown RBP7.15□□□□□ -1.26
USP28-205ENST00000537706 SYT4Q9H2B2 425 aa7.15□□□□□ -1.26
USP28-205ENST00000537706 CNOT2Q9NZN8 540 aaKnown RBP7.15□□□□□ -1.26
USP28-205ENST00000537706 OR6C68A6NDL8 312 aa7.15□□□□□ -1.27
USP28-205ENST00000537706 EFCAB10A6NFE3 127 aa7.15□□□□□ -1.27
USP28-205ENST00000537706 LEUTXA8MZ59 168 aa7.15□□□□□ -1.27
USP28-205ENST00000537706 AP4M1O00189 453 aa7.15□□□□□ -1.27
USP28-205ENST00000537706 SLC22A1O15245 554 aa7.15□□□□□ -1.27
USP28-205ENST00000537706 CDK1P06493 297 aa7.15□□□□□ -1.27
USP28-205ENST00000537706 CD14P08571 375 aa7.15□□□□□ -1.27
USP28-205ENST00000537706 PIPP12273 146 aaPredicted RBP7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms