RNA–Protein interactions for RNA: ENST00000537642.1

USP28-204, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 732 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-204ENST00000537642 DIMT1Q9UNQ2 313 aaKnown RBP12.08□□□□□ -0.48
USP28-204ENST00000537642 DHDHQ9UQ10 334 aa12.08□□□□□ -0.48
USP28-204ENST00000537642 A0A1W2PPH5 198 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 MEIOCA2RUB1 952 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 SULT1B1O43704 296 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 GNAO1P09471 354 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 PRKACAP17612 351 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 MDKP21741 143 aaPredicted RBP12.07□□□□□ -0.48
USP28-204ENST00000537642 OMGP23515 440 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 CAPGP40121 348 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 SNU13P55769 128 aaKnown RBP12.07□□□□□ -0.48
USP28-204ENST00000537642 DLX6P56179 175 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 ERVFRD-1P60508 538 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 ACSM1Q08AH1 577 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 IL18R1Q13478 541 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 ZNF146Q15072 292 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 CDK5R1Q15078 307 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 CCDC58Q4VC31 144 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 ASPHD2Q6ICH7 369 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 LAIR2Q6ISS4 152 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 TMPRSS11AQ6ZMR5 421 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 SERPINA12Q8IW75 414 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 OR8H2Q8N162 312 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 OR52N4Q8NGI2 321 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 OR5D18Q8NGL1 313 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 OR5D14Q8NGL3 314 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 TSEN15Q8WW01 171 aaKnown RBP12.07□□□□□ -0.48
USP28-204ENST00000537642 ZNF747Q9BV97 191 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 HMG20AQ9NP66 347 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 CLEC2DQ9UHP7 191 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 EXOSC1Q9Y3B2 195 aaKnown RBP12.07□□□□□ -0.48
USP28-204ENST00000537642 SF3B6Q9Y3B4 125 aaKnown RBP12.07□□□□□ -0.48
USP28-204ENST00000537642 SIRT4Q9Y6E7 314 aaPredicted RBP12.07□□□□□ -0.48
USP28-204ENST00000537642 HSPE1-MOB4S4R3N1 261 aa12.07□□□□□ -0.48
USP28-204ENST00000537642 MEX3AA1L020 520 aaKnown RBP12.06□□□□□ -0.48
USP28-204ENST00000537642 GPR137BO60478 399 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 PSPNO60542 156 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 KDM4BO94953 1096 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 EDDM3BP56851 147 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 ZP1P60852 638 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 RELBQ01201 579 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 TAF9Q16594 264 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 ZNF529Q6P280 563 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 RPL22L1Q6P5R6 122 aaKnown RBP12.06□□□□□ -0.48
USP28-204ENST00000537642 GDPD3Q7L5L3 318 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 TCF23Q7RTU1 214 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 SAXO1Q8IYX7 474 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 C17orf50Q8WW18 174 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 DYRK2Q92630 601 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 GGHQ92820 318 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 TMEM80Q96HE8 168 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 AJUBAQ96IF1 538 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 CHST6Q9GZX3 395 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 DPAGT1Q9H3H5 408 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 HEXA-AS1Q9H8Q6 139 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 NEK6Q9HC98 313 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 C1RLQ9NZP8 487 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 TRRAPQ9Y4A5 3859 aa12.06□□□□□ -0.48
USP28-204ENST00000537642 KIAA2026Q5HYC2 2103 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 C17orf98A8MV24 154 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 OGG1O15527 345 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 PAHP00439 452 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 LALBAP00709 142 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 CRYBA1P05813 215 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 HCKP08631 526 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 MYL12AP19105 171 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 GABRR1P24046 479 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 SOX2P48431 317 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 RAG2P55895 527 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 EDDM3AQ14507 147 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 KISS1Q15726 138 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 GRK1Q15835 563 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 MIDNQ504T8 468 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 SPIN3Q5JUX0 258 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 C8orf59Q8N0T1 100 aaPredicted RBP12.05□□□□□ -0.48
USP28-204ENST00000537642 OR4S1Q8NGB4 309 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 OR51A2Q8NGJ7 313 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 FBLIM1Q8WUP2 373 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 DCLRE1BQ9H816 532 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 BABAM2Q9NXR7 383 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 NKX1-2Q9UD57 310 aaPredicted RBP12.05□□□□□ -0.48
USP28-204ENST00000537642 GSTK1Q9Y2Q3 226 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 MMP24Q9Y5R2 645 aa12.05□□□□□ -0.48
USP28-204ENST00000537642 hCG_1809904A0A1W2PP81 198 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 A0A1W2PPE2 198 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 A0A1W2PR64 198 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 A0A1W2PRV1 198 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 POM121CA8CG34 1229 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 SIRPB1O00241 398 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 XPNPEP2O43895 674 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 NDUFA7O95182 113 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 ZNF728P0DKX0 622 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 COX7A1P24310 79 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 OR3A1P47881 315 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 BMXP51813 675 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 RPL15P61313 204 aaKnown RBP12.04□□□□□ -0.48
USP28-204ENST00000537642 MEF2CQ06413 473 aaPredicted RBP12.04□□□□□ -0.48
USP28-204ENST00000537642 ST3GAL4Q11206 333 aa12.04□□□□□ -0.48
USP28-204ENST00000537642 ZNF782Q6ZMW2 699 aaPredicted RBP12.04□□□□□ -0.48
USP28-204ENST00000537642 TPRX1Q8N7U7 411 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 459.4 ms