RNA–Protein interactions for RNA: ENST00000536239.1

SKA3-207, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-207ENST00000536239 FARSAQ9Y285 508 aaKnown RBP2.13□□□□□ -2.07
SKA3-207ENST00000536239 MEMO1Q9Y316 297 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 SNX10Q9Y5X0 201 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 DUOX1Q9NRD9 1551 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 BRCA1P38398 1863 aaKnown RBP2.13□□□□□ -2.07
SKA3-207ENST00000536239 STRCQ7RTU9 1775 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 RLFQ13129 1914 aa2.13□□□□□ -2.07
SKA3-207ENST00000536239 ALS2Q96Q42 1657 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 BAZ2BQ9UIF8 2168 aaKnown RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 TRPM7Q96QT4 1865 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 RICTORQ6R327 1708 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 SIGLEC1Q9BZZ2 1709 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 TNS2Q63HR2 1409 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 TRAV8-7A0A075B6U6 113 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 PPIAL4EA0A075B759 164 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 TRAV14DV4A0A0A6YYC5 116 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 TRAV34A0A0B4J273 112 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 A0A0B4J2A0 478 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 PPIAL4CA0A0B4J2A2 164 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 EDDM13A0A1B0GTR0 161 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 A0A1B0GW64 132 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ARRDC5A6NEK1 342 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 HELTA6NFD8 242 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ARL5CA6NH57 179 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 FBLL1A6NHQ2 334 aaKnown RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 OR5B21A6NL26 309 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 VSTM2BA6NLU5 285 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 OR2AG2A6NM03 316 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 IFITM5A6NNB3 132 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 PPIAL4DF5H284 164 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 GABARAPH6UMI1 98 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 J3QR06 171 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 GOSR2O14653 212 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 TAAR5O14804 337 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 AZIN1O14977 448 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ARPC1BO15143 372 aaKnown RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 RBFOX2O43251 390 aaKnown RBP eCLIP2.12□□□□□ -2.07
SKA3-207ENST00000536239 ZNF208O43345 1280 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 OR1F1O43749 312 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 SYNGR3O43761 229 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 PDE6DO43924 150 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 NME6O75414 186 aaPredicted RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 RAD51DO75771 328 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 LRATO95237 230 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 LSM8O95777 96 aaKnown RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 TXNDC12O95881 172 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 TRGC2P03986 189 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 CSN2P05814 226 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 OR4A8P0C604 315 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ANKRD34CP0C6C1 535 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 OR8U9P0C7N5 309 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 PGA3P0DJD8 388 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 SMIM10L1P0DMW3 83 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 PPIAL4FP0DN26 164 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 PPIAL4GP0DN37 164 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ESDP10768 282 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 CD37P11049 281 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 LIPCP11150 499 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 VEGFAP15692 232 aaPredicted RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 CD1DP15813 335 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ZNF19P17023 458 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 AKR1C4P17516 323 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 GPX2P18283 190 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 KITLGP21583 273 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 FCARP24071 287 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 GDF1P27539 372 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 CEACAM3P40198 252 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 OPRD1P41143 372 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ZFP36L2P47974 494 aaKnown RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 CSNK1A1P48729 337 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ARRB1P49407 418 aaPredicted RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 NPY4RP50391 375 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 DIO3P55073 304 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 UCP2P55851 309 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 H2BFSP57053 126 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 PIGPP57054 158 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 MLF1P58340 268 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 RAB10P61026 200 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 OSTNP61366 133 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 RPS23P62266 143 aaKnown RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 DYNLT1P63172 113 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 BTG2P78543 158 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 CDK3Q00526 305 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 SLC25A11Q02978 314 aaKnown RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 BCL2L1Q07817 233 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 AESQ08117 197 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ST3GAL3Q11203 375 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 MELKQ14680 651 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ELOBQ15370 118 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 TMEM183BQ1AE95 376 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 C18orf21Q32NC0 220 aaPredicted RBP2.12□□□□□ -2.07
SKA3-207ENST00000536239 ARHGAP11BQ3KRB8 267 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 ATP6AP1LQ52LC2 224 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 C5orf47Q569G3 176 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 TECRLQ5HYJ1 363 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 RAB41Q5JT25 222 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 SPIN3Q5JUX0 258 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 CTSL3PQ5NE16 218 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 SLC25A30Q5SVS4 291 aa2.12□□□□□ -2.07
SKA3-207ENST00000536239 SDHAF4Q5VUM1 108 aa2.12□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 78.4 ms