RNA–Protein interactions for RNA: ENST00000535659.6

CNN1-202, Transcript of calponin 1, humanhuman

TSL 2 BASIC

Gene CNN1, Length 1,527 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-202ENST00000535659 BATF3Q9NR55 127 aa13.02□□□□□ -0.33
CNN1-202ENST00000535659 FBLN5Q9UBX5 448 aa13.02□□□□□ -0.33
CNN1-202ENST00000535659 OR14J1Q9UGF5 321 aa13.02□□□□□ -0.33
CNN1-202ENST00000535659 GLS2Q9UI32 602 aa13.02□□□□□ -0.33
CNN1-202ENST00000535659 ST3GAL6Q9Y274 331 aa13.02□□□□□ -0.33
CNN1-202ENST00000535659 CCDC168Q8NDH2 2452 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 IGKV1D-17A0A075B6S4 117 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 A0A0B4J203 849 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 SH2D1BO14796 132 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 LDLRAD4O15165 306 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 MGMTP16455 207 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 AMY2BP19961 511 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 DUSP1P28562 367 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 GABRA2P47869 451 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 SNU13P55769 128 aaKnown RBP13.01□□□□□ -0.33
CNN1-202ENST00000535659 NHLRC3Q5JS37 347 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 STUMQ69YW2 141 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 LYPD2Q6UXB3 125 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 CD177Q8N6Q3 437 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 CCL13Q99616 98 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 GAL3ST1Q99999 423 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 SELENOIQ9C0D9 397 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 DNTTIP1Q9H147 329 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 KCNK15Q9H427 330 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 NARFLQ9H6Q4 476 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 ABRACLQ9P1F3 81 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 MIOXQ9UGB7 285 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 OR5V1Q9UGF6 321 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 ZNF222Q9UK12 451 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 PCDHB10Q9UN67 800 aa13.01□□□□□ -0.33
CNN1-202ENST00000535659 PRRC2AP48634 2157 aaKnown RBP13.01□□□□□ -0.33
CNN1-202ENST00000535659 TMEM272A0A1B0GTI8 110 aa13□□□□□ -0.33
CNN1-202ENST00000535659 CEACAM18A8MTB9 384 aa13□□□□□ -0.33
CNN1-202ENST00000535659 MPIG6BO95866 241 aa13□□□□□ -0.33
CNN1-202ENST00000535659 CHRM2P08172 466 aa13□□□□□ -0.33
CNN1-202ENST00000535659 WNT2P09544 360 aa13□□□□□ -0.33
CNN1-202ENST00000535659 SNRPBP14678 240 aaKnown RBP13□□□□□ -0.33
CNN1-202ENST00000535659 ZNF182P17025 639 aaPredicted RBP13□□□□□ -0.33
CNN1-202ENST00000535659 UNC119Q13432 240 aa13□□□□□ -0.33
CNN1-202ENST00000535659 PIGYQ3MUY2 71 aa13□□□□□ -0.33
CNN1-202ENST00000535659 ZNF788Q6ZQV5 615 aa13□□□□□ -0.33
CNN1-202ENST00000535659 DYNC2LI1Q8TCX1 351 aa13□□□□□ -0.33
CNN1-202ENST00000535659 KCTD12Q96CX2 325 aaKnown RBP13□□□□□ -0.33
CNN1-202ENST00000535659 SDSLQ96GA7 329 aa13□□□□□ -0.33
CNN1-202ENST00000535659 POM121Q96HA1 1249 aa13□□□□□ -0.33
CNN1-202ENST00000535659 MED30Q96HR3 178 aa13□□□□□ -0.33
CNN1-202ENST00000535659 REG4Q9BYZ8 158 aa13□□□□□ -0.33
CNN1-202ENST00000535659 ZNF665Q9H7R5 613 aa13□□□□□ -0.33
CNN1-202ENST00000535659 PATZ1Q9HBE1 687 aaKnown RBP13□□□□□ -0.33
CNN1-202ENST00000535659 KAAG1Q9UBP8 84 aa13□□□□□ -0.33
CNN1-202ENST00000535659 RAB22AQ9UL26 194 aa13□□□□□ -0.33
CNN1-202ENST00000535659 IGHV4-61A0A0C4DH41 118 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 GEMIN2O14893 280 aaKnown RBP12.99□□□□□ -0.33
CNN1-202ENST00000535659 DEGS1O15121 323 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 TMPRSS2O15393 492 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 ADAM20O43506 726 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 HAND1O96004 215 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 PAHP00439 452 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 TFF1P04155 84 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 USF1P22415 310 aaPredicted RBP12.99□□□□□ -0.33
CNN1-202ENST00000535659 CPT2P23786 658 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 SOX6P35712 828 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 CEBPDP49716 269 aaPredicted RBP12.99□□□□□ -0.33
CNN1-202ENST00000535659 RBM11P57052 281 aaKnown RBP12.99□□□□□ -0.33
CNN1-202ENST00000535659 SCAND1P57086 179 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 LMO4P61968 165 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 RPS27AP62979 156 aaKnown RBP12.99□□□□□ -0.33
CNN1-202ENST00000535659 SCN1BQ07699 218 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 IL13RA2Q14627 380 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 PDCD1Q15116 288 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 TAF9Q16594 264 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 FOXB2Q5VYV0 432 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 SLC36A1Q7Z2H8 476 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 CLDND2Q8NHS1 167 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 PTX4Q96A99 478 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 TMEM59Q9BXS4 323 aa12.99□□□□□ -0.33
CNN1-202ENST00000535659 RNF223E7ERA6 249 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 RAB6AP20340 208 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 LMO1P25800 156 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 RIPPLY3P57055 190 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 COL10A1Q03692 680 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 PLA2G7Q13093 441 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 Q6P435 159 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 LINC00596Q86U02 117 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 ZNF561Q8N587 486 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 ACOT12Q8WYK0 555 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 Q96M66 194 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 GAFA1Q96PS6 74 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 URM1Q9BTM9 101 aaKnown RBP12.98□□□□□ -0.33
CNN1-202ENST00000535659 SPATA2Q9UM82 520 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 MAB21L2Q9Y586 359 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 ZNF469Q96JG9 3925 aaPredicted RBP12.98□□□□□ -0.33
CNN1-202ENST00000535659 A0A096LNT2 108 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 FAM90A10PA6NDY2 464 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 FAM90A18PA6NE21 464 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 FAM90A16PA6NEW6 464 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 FAM90A20PA6NIJ5 464 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 NKX6-3A6NJ46 265 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 FAM90A8PA6NJQ4 464 aa12.98□□□□□ -0.33
CNN1-202ENST00000535659 FAM90A7PA6NKC0 464 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms