RNA–Protein interactions for RNA: ENST00000533820.5

CAPN1-226, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-226ENST00000533820 EIF5AL1Q6IS14 154 aaKnown RBP16.86■□□□□ 0.29
CAPN1-226ENST00000533820 OR5L1Q8NGL2 311 aa16.86■□□□□ 0.29
CAPN1-226ENST00000533820 PRRX2Q99811 253 aa16.86■□□□□ 0.29
CAPN1-226ENST00000533820 AQP7P3A6NL99 342 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 MSX1P28360 303 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 KIAA0141Q14154 515 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-226ENST00000533820 ENDOGQ14249 297 aaKnown RBP16.85■□□□□ 0.29
CAPN1-226ENST00000533820 MAJINQ3KP22 176 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 LYZL2Q7Z4W2 148 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 GJC3Q8NFK1 279 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 SSC4DQ8WTU2 575 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 NPIPA2E9PIF3 369 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 NPIPA3F8WFD2 350 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 EREGO14944 169 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 LYL1P12980 280 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 CCL1P22362 96 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 PKIAP61925 76 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 HSD17B11Q8NBQ5 300 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 IP6K3Q96PC2 410 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 CHST5Q9GZS9 411 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 RARRES3Q9UL19 164 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 M0R036 132 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 CYTIPO60759 359 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 CST4P01036 141 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 FCGR3AP08637 254 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 OR5AC1P0C628 307 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 PAX6P26367 422 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 ZNF239Q16600 458 aaKnown RBP16.85■□□□□ 0.29
CAPN1-226ENST00000533820 SAT2Q96F10 170 aaPredicted RBP16.85■□□□□ 0.29
CAPN1-226ENST00000533820 EIF5A2Q9GZV4 153 aaKnown RBP16.85■□□□□ 0.29
CAPN1-226ENST00000533820 RFNGQ9Y644 331 aa16.85■□□□□ 0.29
CAPN1-226ENST00000533820 SERPINE3A8MV23 424 aa16.84■□□□□ 0.29
CAPN1-226ENST00000533820 TSPAN15O95858 294 aa16.84■□□□□ 0.29
CAPN1-226ENST00000533820 ABCA11PQ4W5N1 156 aa16.84■□□□□ 0.29
CAPN1-226ENST00000533820 MIDNQ504T8 468 aa16.84■□□□□ 0.29
CAPN1-226ENST00000533820 OR11L1Q8NGX0 322 aa16.84■□□□□ 0.29
CAPN1-226ENST00000533820 AK3Q9UIJ7 227 aa16.84■□□□□ 0.29
CAPN1-226ENST00000533820 ZNF407Q9C0G0 2248 aa16.84■□□□□ 0.29
CAPN1-226ENST00000533820 PRSS47A8MTI9 375 aa16.84■□□□□ 0.29
CAPN1-226ENST00000533820 PRH1P02810 166 aa16.84■□□□□ 0.29
CAPN1-226ENST00000533820 SRFP11831 508 aa16.84■□□□□ 0.29
CAPN1-226ENST00000533820 SULT1A2P50226 295 aa16.84■□□□□ 0.29
CAPN1-226ENST00000533820 AFF3P51826 1226 aaKnown RBP16.84■□□□□ 0.29
CAPN1-226ENST00000533820 PIGYQ3MUY2 71 aa16.84■□□□□ 0.29
CAPN1-226ENST00000533820 RPUSD3Q6P087 351 aaKnown RBP16.84■□□□□ 0.29
CAPN1-226ENST00000533820 WDR74Q6RFH5 385 aaPredicted RBP16.84■□□□□ 0.29
CAPN1-226ENST00000533820 BTNL8Q6UX41 500 aa16.84■□□□□ 0.29
CAPN1-226ENST00000533820 C5orf24Q7Z6I8 188 aa16.84■□□□□ 0.29
CAPN1-226ENST00000533820 RABEPKQ7Z6M1 372 aa16.84■□□□□ 0.29
CAPN1-226ENST00000533820 HAS2Q92819 552 aa16.84■□□□□ 0.29
CAPN1-226ENST00000533820 SH3BGRL3Q9H299 93 aa16.84■□□□□ 0.29
CAPN1-226ENST00000533820 CCL7P80098 99 aa16.83■□□□□ 0.29
CAPN1-226ENST00000533820 SPNS3Q6ZMD2 512 aa16.83■□□□□ 0.29
CAPN1-226ENST00000533820 OR9K2Q8NGE7 335 aa16.83■□□□□ 0.29
CAPN1-226ENST00000533820 NELFAQ9H3P2 528 aa16.83■□□□□ 0.29
CAPN1-226ENST00000533820 ZNF576Q9H609 170 aa16.83■□□□□ 0.29
CAPN1-226ENST00000533820 ANXA10Q9UJ72 324 aa16.83■□□□□ 0.29
CAPN1-226ENST00000533820 A0A1W2PQM1 296 aa16.83■□□□□ 0.28
CAPN1-226ENST00000533820 FOXI3A8MTJ6 420 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-226ENST00000533820 DEDDO75618 318 aa16.83■□□□□ 0.28
CAPN1-226ENST00000533820 MBPP02686 304 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-226ENST00000533820 EIF5AP63241 154 aaKnown RBP16.83■□□□□ 0.28
CAPN1-226ENST00000533820 SLC35A1P78382 337 aa16.83■□□□□ 0.28
CAPN1-226ENST00000533820 HGFACQ04756 655 aa16.83■□□□□ 0.28
CAPN1-226ENST00000533820 HIST3H3Q16695 136 aa16.83■□□□□ 0.28
CAPN1-226ENST00000533820 TMEM268Q5VZI3 342 aa16.83■□□□□ 0.28
CAPN1-226ENST00000533820 CADM4Q8NFZ8 388 aa16.83■□□□□ 0.28
CAPN1-226ENST00000533820 ULBP2Q9BZM5 246 aa16.83■□□□□ 0.28
CAPN1-226ENST00000533820 IGLV3-12A0A075B6K2 115 aa16.83■□□□□ 0.28
CAPN1-226ENST00000533820 CCDC163A0A0D9SF12 145 aa16.83■□□□□ 0.28
CAPN1-226ENST00000533820 FAM189A2Q15884 450 aa16.83■□□□□ 0.28
CAPN1-226ENST00000533820 AARDQ4LEZ3 155 aa16.83■□□□□ 0.28
CAPN1-226ENST00000533820 SLC25A53Q5H9E4 307 aa16.83■□□□□ 0.28
CAPN1-226ENST00000533820 ZNF385CQ66K41 422 aaPredicted RBP16.83■□□□□ 0.28
CAPN1-226ENST00000533820 MEX3BQ6ZN04 569 aaKnown RBP16.83■□□□□ 0.28
CAPN1-226ENST00000533820 GPHA2Q96T91 129 aa16.83■□□□□ 0.28
CAPN1-226ENST00000533820 NUDT19A8MXV4 375 aa16.82■□□□□ 0.28
CAPN1-226ENST00000533820 CCL3P10147 92 aa16.82■□□□□ 0.28
CAPN1-226ENST00000533820 THBS4P35443 961 aa16.82■□□□□ 0.28
CAPN1-226ENST00000533820 RTN4IP1Q8WWV3 396 aaPredicted RBP16.82■□□□□ 0.28
CAPN1-226ENST00000533820 RCL1Q9Y2P8 373 aaKnown RBP16.82■□□□□ 0.28
CAPN1-226ENST00000533820 CHCHD2Q9Y6H1 151 aaPredicted RBP16.82■□□□□ 0.28
CAPN1-226ENST00000533820 TNFSF11O14788 317 aa16.82■□□□□ 0.28
CAPN1-226ENST00000533820 PHOX2AO14813 284 aa16.82■□□□□ 0.28
CAPN1-226ENST00000533820 DHHO43323 396 aa16.82■□□□□ 0.28
CAPN1-226ENST00000533820 LCATP04180 440 aa16.82■□□□□ 0.28
CAPN1-226ENST00000533820 HOXA5P20719 270 aa16.82■□□□□ 0.28
CAPN1-226ENST00000533820 GLP1RP43220 463 aa16.82■□□□□ 0.28
CAPN1-226ENST00000533820 NHLH2Q02577 135 aa16.82■□□□□ 0.28
CAPN1-226ENST00000533820 GFI1BQ5VTD9 330 aa16.82■□□□□ 0.28
CAPN1-226ENST00000533820 SUMF1Q8NBK3 374 aa16.82■□□□□ 0.28
CAPN1-226ENST00000533820 SPACA1Q9HBV2 294 aa16.82■□□□□ 0.28
CAPN1-226ENST00000533820 WFDC1Q9HC57 220 aa16.82■□□□□ 0.28
CAPN1-226ENST00000533820 OCIAD1Q9NX40 245 aa16.82■□□□□ 0.28
CAPN1-226ENST00000533820 FBXO7Q9Y3I1 522 aa16.82■□□□□ 0.28
CAPN1-226ENST00000533820 DOCK7Q96N67 2140 aa16.82■□□□□ 0.28
CAPN1-226ENST00000533820 ETV2O00321 342 aaPredicted RBP16.81■□□□□ 0.28
CAPN1-226ENST00000533820 GEMIN2O14893 280 aaKnown RBP16.81■□□□□ 0.28
CAPN1-226ENST00000533820 CD5P06127 495 aa16.81■□□□□ 0.28
CAPN1-226ENST00000533820 ZNF774Q6NX45 483 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms