RNA–Protein interactions for RNA: ENST00000533704.1

CAPN1-225, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 643 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-225ENST00000533704 CCR9P51686 369 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 DYNC1I2Q13409 638 aaKnown RBP8.5□□□□□ -1.05
CAPN1-225ENST00000533704 GALEQ14376 348 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 GRK1Q15835 563 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 LRRC75BQ2VPJ9 315 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 FDX2Q6P4F2 183 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 TREML4Q6UXN2 200 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 LHFPL2Q6ZUX7 228 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 Q8IYB0 196 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 FAM58AQ8N1B3 248 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 TPRX1Q8N7U7 411 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 ZSCAN4Q8NAM6 433 aaPredicted RBP8.5□□□□□ -1.05
CAPN1-225ENST00000533704 BEND2Q8NDZ0 799 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 DNAAF1Q8NEP3 725 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 ZNF555Q8NEP9 628 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 OR51A4Q8NGJ6 313 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 RHOXF1Q8NHV9 184 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 TSEN15Q8WW01 171 aaKnown RBP8.5□□□□□ -1.05
CAPN1-225ENST00000533704 STMN2Q93045 179 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 SPSB1Q96BD6 273 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 SNX22Q96L94 193 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 ISG20L2Q9H9L3 353 aaKnown RBP8.5□□□□□ -1.05
CAPN1-225ENST00000533704 FAM118AQ9NWS6 357 aa8.5□□□□□ -1.05
CAPN1-225ENST00000533704 ARG1P05089 322 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 HCKP08631 526 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 ZNF728P0DKX0 622 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 PEX2P28328 305 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 TGFBR2P37173 567 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 GBX2P52951 348 aaPredicted RBP8.49□□□□□ -1.05
CAPN1-225ENST00000533704 KRTAP10-3P60369 221 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 SCN1BQ07699 218 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 LPCAT4Q643R3 524 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 UTS2BQ765I0 119 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 RNF144BQ7Z419 303 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 LHFPL4Q7Z7J7 247 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 TRAPPC6BQ86SZ2 158 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 OR8H2Q8N162 312 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 C11orf42Q8N5U0 333 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 OR52I1Q8NGK6 324 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 ZNF714Q96N38 554 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 COMMD4Q9H0A8 199 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 ZCCHC4Q9H5U6 513 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 TCF7L1Q9HCS4 588 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 ERVK13-1Q9NX77 482 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 ING3Q9NXR8 418 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 GLS2Q9UI32 602 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 GSTK1Q9Y2Q3 226 aa8.49□□□□□ -1.05
CAPN1-225ENST00000533704 RPL36Q9Y3U8 105 aaKnown RBP8.49□□□□□ -1.05
CAPN1-225ENST00000533704 TRBV2A0A0J9YWF9 115 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 hADV38S2A0JD32 116 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 C17orf98A8MV24 154 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 E9PI62 339 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 CCDC159P0C7I6 412 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 TMEM225BP0DP42 221 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 DLX6P56179 175 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 PROK1P58294 105 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 MEF2CQ06413 473 aaPredicted RBP8.48□□□□□ -1.05
CAPN1-225ENST00000533704 RAB40BQ12829 278 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 PDZK1IP1Q13113 114 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 FAM189A2Q15884 450 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 SMN1Q16637 294 aaKnown RBP8.48□□□□□ -1.05
CAPN1-225ENST00000533704 LRRC36Q1X8D7 754 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 KLHL22Q53GT1 634 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 SLC35E4Q6ICL7 350 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 SYS1Q8N2H4 156 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 OR4S1Q8NGB4 309 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 OR52N4Q8NGI2 321 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 OR13D1Q8NGV5 346 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 OR5AK2Q8NH90 309 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 PPP1R35Q8TAP8 253 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 APH1BQ8WW43 257 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 AJUBAQ96IF1 538 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 NKX3-1Q99801 234 aaPredicted RBP8.48□□□□□ -1.05
CAPN1-225ENST00000533704 PDCD1LG2Q9BQ51 273 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 EXOSC4Q9NPD3 245 aaKnown RBP8.48□□□□□ -1.05
CAPN1-225ENST00000533704 INPP5EQ9NRR6 644 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 SMPD3Q9NY59 655 aaPredicted RBP8.48□□□□□ -1.05
CAPN1-225ENST00000533704 DHDHQ9UQ10 334 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 SIGLEC9Q9Y336 463 aa8.48□□□□□ -1.05
CAPN1-225ENST00000533704 IGKV1-12A0A0C4DH73 117 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 TMEM212A6NML5 194 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 M0QZ24 198 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 SH2D1BO14796 132 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 TIMM23O14925 209 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 PSPNO60542 156 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 ZFPL1O95159 310 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 CLIC3O95833 236 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 IGKV1D-12P01611 117 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 IGHV1-8P0DP01 117 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 ZNF44P15621 663 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 CALRP27797 417 aaKnown RBP8.47□□□□□ -1.05
CAPN1-225ENST00000533704 GABRA5P31644 462 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 OR3A1P47881 315 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 SOX2P48431 317 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 RAB13P51153 203 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 TCF23Q7RTU1 214 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 SATL1Q86VE3 508 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 DYNAPQ8N1N2 210 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 OR4C13Q8NGP0 309 aa8.47□□□□□ -1.05
CAPN1-225ENST00000533704 CYGBQ8WWM9 190 aa8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms