RNA–Protein interactions for RNA: ENST00000530784.1

CSDE1-213, Transcript of cold shock domain containing E1, humanhuman

TSL 2

Gene CSDE1, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-213ENST00000530784 BCL2L11O43521 198 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 IFNA14P01570 189 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 RLN1P04808 185 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 CST2P09228 141 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 SBK2P0C263 348 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 TSPAN19P0C672 248 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 THRBP10828 461 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 FOLR2P14207 255 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 MSR1P21757 451 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 GUCA1AP43080 201 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-213ENST00000530784 CRYBA2P53672 197 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 BTG1P62324 171 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 ZNF154Q13106 437 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 BAMBIQ13145 260 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 FAM106AQ4KMX7 169 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 TMEM155Q4W5P6 130 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 ZNF841Q6ZN19 808 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 CCDC80Q76M96 950 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 CROCCP3Q8IVE0 287 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 NKAIN4Q8IVV8 208 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 OR2Z1Q8NG97 314 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 LIPHQ8WWY8 451 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 LRRC58Q96CX6 371 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 BSCL2Q96G97 398 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-213ENST00000530784 RBP7Q96R05 134 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 SH3GL1Q99961 368 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 CHCHD5Q9BSY4 110 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 ALKBH7Q9BT30 221 aaPredicted RBP5.32□□□□□ -1.56
CSDE1-213ENST00000530784 ALG12Q9BV10 488 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 TXNIPQ9H3M7 391 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 PATZ1Q9HBE1 687 aaKnown RBP5.32□□□□□ -1.56
CSDE1-213ENST00000530784 MMP26Q9NRE1 261 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 TMEM106BQ9NUM4 274 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 PRR34Q9NV39 138 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 DCAF16Q9NXF7 216 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 PLEK2Q9NYT0 353 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 OR5V1Q9UGF6 321 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 RIMS3Q9UJD0 308 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 KLHL21Q9UJP4 597 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 TIMM10BQ9Y5J6 103 aa5.32□□□□□ -1.56
CSDE1-213ENST00000530784 IGLV4-3A0A075B6K6 122 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 A0A0B4J203 849 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 IGHV3-38A0A0C4DH36 116 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 A6NIZ1 184 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 C12orf71A8MTZ7 269 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 TRAPPC2LH3BP13 241 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 SHOX2O60902 331 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-213ENST00000530784 IFI30P13284 250 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 TUBG1P23258 451 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 IFNA8P32881 189 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 MDH2P40926 338 aaKnown RBP5.31□□□□□ -1.56
CSDE1-213ENST00000530784 OR1E2P47887 323 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 GZMMP51124 257 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 RAP1BP61224 184 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 RPL27P61353 136 aaKnown RBP5.31□□□□□ -1.56
CSDE1-213ENST00000530784 RAP1AP62834 184 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 SCRN3Q0VDG4 424 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 PSG7Q13046 419 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 CYLC2Q14093 348 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-213ENST00000530784 ENDOGQ14249 297 aaKnown RBP5.31□□□□□ -1.56
CSDE1-213ENST00000530784 ZMYND11Q15326 602 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 SPRNQ5BIV9 151 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 KLF17Q5JT82 389 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-213ENST00000530784 AGBL2Q5U5Z8 902 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 ERICH5Q6P6B1 374 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 DHRS11Q6UWP2 260 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 KRT77Q7Z794 578 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 PARP8Q8N3A8 854 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 ZNF283Q8N7M2 679 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 CLDN22Q8N7P3 220 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 OR52E2Q8NGJ4 325 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 BPIFA2Q96DR5 249 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 SAMD8Q96LT4 415 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 C1orf147Q96MC9 270 aaPredicted RBP5.31□□□□□ -1.56
CSDE1-213ENST00000530784 TUBG2Q9NRH3 451 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 TP53TG3Q9ULZ0 132 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 INSIG2Q9Y5U4 225 aa5.31□□□□□ -1.56
CSDE1-213ENST00000530784 TRAV27A0A087WT01 109 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 TRAV40A0A0B4J280 105 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 hCG_38984A0A1B0GV85 526 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 CEACAM18A8MTB9 384 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 H7C1C5 153 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 CLDN34H7C241 214 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 COX5BP10606 129 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 RPS2P15880 293 aaKnown RBP5.3□□□□□ -1.56
CSDE1-213ENST00000530784 KITLGP21583 273 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 RBMXP38159 391 aaKnown RBP5.3□□□□□ -1.56
CSDE1-213ENST00000530784 HTR5AP47898 357 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 ERVK-16P61578 105 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 LCN6P62502 163 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 DEFA6Q01524 100 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 ST3GAL3Q11203 375 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 ZNF146Q15072 292 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 HIGD2BQ4VC39 106 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 LRRC23Q53EV4 343 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-213ENST00000530784 BEND6Q5SZJ8 279 aaPredicted RBP5.3□□□□□ -1.56
CSDE1-213ENST00000530784 KRTAP5-1Q6L8H4 278 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 NANOGP8Q6NSW7 305 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 LEG1Q6P5S2 330 aa5.3□□□□□ -1.56
CSDE1-213ENST00000530784 BTNL3Q6UXE8 466 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms