RNA–Protein interactions for RNA: ENST00000529476.1

USF1-209, Transcript of upstream transcription factor 1, humanhuman

TSL 3

Gene USF1, Length 581 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-209ENST00000529476 PDCD5O14737 125 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 AIREO43918 545 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 ZNF16P17020 682 aaPredicted RBP11.65□□□□□ -0.54
USF1-209ENST00000529476 ZFP36P26651 326 aaKnown RBP11.65□□□□□ -0.54
USF1-209ENST00000529476 DUSP1P28562 367 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 MTNR1BP49286 362 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 GZMKP49863 264 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 OR10A3P58181 314 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 LCN2P80188 198 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 IKZF1Q13422 519 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 TIMM50Q3ZCQ8 353 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 SLC22A6Q4U2R8 563 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 ESCO2Q56NI9 601 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 CYB5R2Q6BCY4 276 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 ELP2Q6IA86 826 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 ZNF841Q6ZN19 808 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 SLC36A1Q7Z2H8 476 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 FGFRL1Q8N441 504 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 LINC01356Q8N9X3 169 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 SDSLQ96GA7 329 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 C1orf147Q96MC9 270 aaPredicted RBP11.65□□□□□ -0.54
USF1-209ENST00000529476 KCTD7Q96MP8 289 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 SSBP3Q9BWW4 388 aaPredicted RBP11.65□□□□□ -0.54
USF1-209ENST00000529476 DNTTIP1Q9H147 329 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 RHOFQ9HBH0 211 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 IL36GQ9NZH8 169 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 MAB21L2Q9Y586 359 aa11.65□□□□□ -0.54
USF1-209ENST00000529476 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.64□□□□□ -0.553e-7■■□□□ 13.2
USF1-209ENST00000529476 MALRD1Q5VYJ5 2156 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 A0A1W2PP11 408 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 B4DSR2 109 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 DVL1O14640 695 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 SIGLEC5O15389 551 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 LY6G6DO95868 133 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 RAB3BP20337 219 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 SERPINA2P20848 420 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 CPT2P23786 658 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 HTR2CP28335 458 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 TGFBR1P36897 503 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 FGF12P61328 243 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 LSM3P62310 102 aaKnown RBP11.64□□□□□ -0.55
USF1-209ENST00000529476 GNB2P62879 340 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 IL13RA1P78552 427 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 DGUOKQ16854 277 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 WDR25Q64LD2 544 aaPredicted RBP11.64□□□□□ -0.55
USF1-209ENST00000529476 FIP1L1Q6UN15 594 aaKnown RBP11.64□□□□□ -0.55
USF1-209ENST00000529476 GDPGP1Q6ZNW5 385 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 GPR141Q7Z602 305 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 NR2C2APQ86WQ0 139 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 ZNRF1Q8ND25 227 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 Q8NFD4 153 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 TBC1D15Q8TC07 691 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 MED30Q96HR3 178 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 PLGRKTQ9HBL7 147 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 CLN8Q9UBY8 286 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 V9GY05 133 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 STAB1Q9NY15 2570 aa11.64□□□□□ -0.55
USF1-209ENST00000529476 A8MXK9 166 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 SLC17A2O00624 439 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 SLC22A1O15245 554 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 NDUFB3O43676 98 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 ZNF780AO75290 641 aaPredicted RBP11.63□□□□□ -0.55
USF1-209ENST00000529476 HAND1O96004 215 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 TGFAP01135 160 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 CSTBP04080 98 aaKnown RBP11.63□□□□□ -0.55
USF1-209ENST00000529476 MSMBP08118 114 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 CLEC2LP0C7M8 214 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 SDC2P34741 201 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 BMXP51813 675 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 COL10A1Q03692 680 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 ZNF146Q15072 292 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 PDCD1Q15116 288 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 P2RY14Q15391 338 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 RAB11BQ15907 218 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 PIGYQ3MUY2 71 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 SPIN3Q5JUX0 258 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 HES5Q5TA89 166 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 FAM166AQ6J272 317 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 SLC16A12Q6ZSM3 486 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 TMEM185AQ8NFB2 350 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 OR6M1Q8NGM8 313 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 ST8SIA4Q92187 359 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 SLC25A28Q96A46 364 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 NAA50Q9GZZ1 169 aaKnown RBP11.63□□□□□ -0.55
USF1-209ENST00000529476 KCNK15Q9H427 330 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 BANF2Q9H503 90 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 SCOCQ9UIL1 159 aa11.63□□□□□ -0.55
USF1-209ENST00000529476 A0A0G2JK05 382 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 SIRPB1O00241 398 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 SH2D1BO14796 132 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 CD5LO43866 347 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 FOXH1O75593 365 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 CHRM2P08172 466 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 GTF2F2P13984 249 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 RPL5P46777 297 aaKnown RBP11.62□□□□□ -0.55
USF1-209ENST00000529476 NPY4RP50391 375 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 PSMD7P51665 324 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 CAV3P56539 151 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 CLDN12P56749 244 aa11.62□□□□□ -0.55
USF1-209ENST00000529476 MXD1Q05195 221 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms