RNA–Protein interactions for RNA: ENST00000528484.5

CMTM1-211, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 726 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-211ENST00000528484 HCCSP53701 268 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 PRRX1P54821 245 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 RAB25P57735 213 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 RPL23AP62750 156 aaKnown RBP9.2□□□□□ -0.94
CMTM1-211ENST00000528484 BDH1Q02338 343 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 KPNB1Q14974 876 aaKnown RBP9.2□□□□□ -0.94
CMTM1-211ENST00000528484 DHFR2Q86XF0 187 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 EGFL6Q8IUX8 553 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 TPRX1Q8N7U7 411 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 KLHL30-AS1Q8NEE0 82 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 TFAP2CQ92754 450 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 SLAMF9Q96A28 289 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 BORCS8Q96FH0 119 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 LRGUKQ96M69 825 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 CNN2Q99439 309 aaKnown RBP9.2□□□□□ -0.94
CMTM1-211ENST00000528484 ADI1Q9BV57 179 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 PRRG3Q9BZD7 231 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 CHST6Q9GZX3 395 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 FAM107BQ9H098 131 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 PCDHB16Q9NRJ7 776 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 OR52A1Q9UKL2 312 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 MOB4Q9Y3A3 225 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 SNX5Q9Y5X3 404 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 R4GMQ9 66 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 HSPE1-MOB4S4R3N1 261 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 V9GYS6 101 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 SACSQ9NZJ4 4579 aa9.2□□□□□ -0.94
CMTM1-211ENST00000528484 DYNC2H1Q8NCM8 4307 aaKnown RBP9.19□□□□□ -0.94
CMTM1-211ENST00000528484 A6NIN4 97 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 OOSP1A8MZH6 123 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 INMTO95050 263 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 CST1P01037 141 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 TTRP02766 147 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 RAP2AP10114 183 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 OSMP13725 252 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 CDK2P24941 298 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 OR3A4PP47883 348 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 MFGE8Q08431 387 aaPredicted RBP9.19□□□□□ -0.94
CMTM1-211ENST00000528484 DOC2BQ14184 412 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 C8orf86Q6ZUL3 223 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 OR2W3Q7Z3T1 314 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 ZNF329Q86UD4 541 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 ELMOD2Q8IZ81 293 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 COMMD1Q8N668 190 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 BBS1Q8NFJ9 593 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 OR4D6Q8NGJ1 314 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 OR14K1Q8NGZ2 314 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 MNTQ99583 582 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 CADM1Q9BY67 442 aaKnown RBP9.19□□□□□ -0.94
CMTM1-211ENST00000528484 TTTY10Q9BZA0 68 aa9.19□□□□□ -0.94
CMTM1-211ENST00000528484 TMEM82A0PJX8 343 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 SH2D7A6NKC9 451 aaPredicted RBP9.18□□□□□ -0.94
CMTM1-211ENST00000528484 SERPINE3A8MV23 424 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 H0YHG0 523 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 SYT7O43581 403 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 OCM2P0CE71 109 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 OCMP0CE72 109 aaPredicted RBP9.18□□□□□ -0.94
CMTM1-211ENST00000528484 SLC2A5P22732 501 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 ERP29P30040 261 aaKnown RBP9.18□□□□□ -0.94
CMTM1-211ENST00000528484 P2RX3P56373 397 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 CDC42P60953 191 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 HES1Q14469 280 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 RBM39Q14498 530 aaKnown RBP9.18□□□□□ -0.94
CMTM1-211ENST00000528484 SPIN3Q5JUX0 258 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 TPTE2P1Q5T6R2 138 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 PRAMEF5Q5TYX0 476 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 ZNF322Q6U7Q0 402 aaPredicted RBP9.18□□□□□ -0.94
CMTM1-211ENST00000528484 C10orf99Q6UWK7 81 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 HEPN1Q6WQI6 88 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 ETV3LQ6ZN32 361 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 SLC25A26Q70HW3 274 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 TCF23Q7RTU1 214 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 FOXRED2Q8IWF2 684 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 ARHGAP24Q8N264 748 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 CCDC54Q8NEL0 328 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 Q8NFD4 153 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 RPEQ96AT9 228 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 SEBOXQ9HB31 216 aaPredicted RBP9.18□□□□□ -0.94
CMTM1-211ENST00000528484 KRT84Q9NSB2 600 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 TAS2R3Q9NYW6 316 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 MTCH1Q9NZJ7 389 aa9.18□□□□□ -0.94
CMTM1-211ENST00000528484 H2AFY2Q9P0M6 372 aaPredicted RBP9.18□□□□□ -0.94
CMTM1-211ENST00000528484 AMMECR1Q9Y4X0 333 aaPredicted RBP9.18□□□□□ -0.94
CMTM1-211ENST00000528484 ZNF670-ZNF695F2Z2N8 137 aa9.17□□□□□ -0.94
CMTM1-211ENST00000528484 IGHA1P01876 353 aa9.17□□□□□ -0.94
CMTM1-211ENST00000528484 HOXB6P17509 224 aaKnown RBP9.17□□□□□ -0.94
CMTM1-211ENST00000528484 PRKACAP17612 351 aa9.17□□□□□ -0.94
CMTM1-211ENST00000528484 PTGFRP43088 359 aa9.17□□□□□ -0.94
CMTM1-211ENST00000528484 RBP2P50120 134 aa9.17□□□□□ -0.94
CMTM1-211ENST00000528484 ATP1B3P54709 279 aa9.17□□□□□ -0.94
CMTM1-211ENST00000528484 CXCR4P61073 352 aa9.17□□□□□ -0.94
CMTM1-211ENST00000528484 CDK5Q00535 292 aa9.17□□□□□ -0.94
CMTM1-211ENST00000528484 ZNF91Q05481 1191 aa9.17□□□□□ -0.94
CMTM1-211ENST00000528484 BNIP1Q12981 228 aa9.17□□□□□ -0.94
CMTM1-211ENST00000528484 C9orf66Q5T8R8 295 aa9.17□□□□□ -0.94
CMTM1-211ENST00000528484 ZNF695Q8IW36 515 aa9.17□□□□□ -0.94
CMTM1-211ENST00000528484 FAM58AQ8N1B3 248 aa9.17□□□□□ -0.94
CMTM1-211ENST00000528484 OR5M8Q8NGP6 311 aa9.17□□□□□ -0.94
CMTM1-211ENST00000528484 TOMM40LQ969M1 308 aa9.17□□□□□ -0.94
CMTM1-211ENST00000528484 HRASLS5Q96KN8 279 aa9.17□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms