RNA–Protein interactions for RNA: ENST00000528336.1

PCF11-202, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 5

Gene PCF11, Length 1,041 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-202ENST00000528336 SSNA1O43805 119 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 KLRC4O43908 158 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 FKBP6O75344 327 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 SNAP29O95721 258 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 DHFRP00374 187 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 IGHV3-9P01782 118 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 CTSLP07711 333 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 SNRPCP09234 159 aaKnown RBP4.26□□□□□ -1.73
PCF11-202ENST00000528336 PGAM2P15259 253 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 ZNF250P15622 560 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 PSMA1P25786 263 aaKnown RBP4.26□□□□□ -1.73
PCF11-202ENST00000528336 CASP1P29466 404 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 SSTR5P35346 364 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 MAGEA12P43365 314 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 GABRA4P48169 554 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 GTF2BQ00403 316 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 RPL18AQ02543 176 aaKnown RBP4.26□□□□□ -1.73
PCF11-202ENST00000528336 TGFBR3Q03167 851 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 PNOCQ13519 176 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 TFDP2Q14188 446 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 ARL6IP1Q15041 203 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 MICAQ29983 383 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 GSG1Q2KHT4 349 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 ZCWPW2Q504Y3 356 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 ZNF57Q68EA5 555 aaPredicted RBP4.26□□□□□ -1.73
PCF11-202ENST00000528336 ZNF720Q7Z2F6 126 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 TMEM135Q86UB9 458 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 HORMAD1Q86X24 394 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 PHF13Q86YI8 300 aaPredicted RBP4.26□□□□□ -1.73
PCF11-202ENST00000528336 SPICQ8N5J4 248 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 OR51D1Q8NGF3 324 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 VN1R17PQ8TDU5 208 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 TMEM234Q8WY98 164 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 SCGB3A2Q96PL1 93 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 PDCD1LG2Q9BQ51 273 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 DDA1Q9BW61 102 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 EXOSC3Q9NQT5 275 aaKnown RBP4.26□□□□□ -1.73
PCF11-202ENST00000528336 CES1P1Q9UKY3 287 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 ASF1AQ9Y294 204 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 ARL2BPQ9Y2Y0 163 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 OR51B2Q9Y5P1 312 aa4.26□□□□□ -1.73
PCF11-202ENST00000528336 TCHHQ07283 1943 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 LAMA2P24043 3122 aaKnown RBP4.25□□□□□ -1.73
PCF11-202ENST00000528336 TINCRA0A1B0GVN0 87 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 A8MU10 97 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 ZNF705EA8MWA4 302 aaPredicted RBP4.25□□□□□ -1.73
PCF11-202ENST00000528336 NME4O00746 187 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 PFDN6O15212 129 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 RAD51CO43502 376 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 ENSAO43768 121 aaKnown RBP4.25□□□□□ -1.73
PCF11-202ENST00000528336 SLC16A7O60669 478 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 CTNSO60931 367 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 DCTN3O75935 186 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 KRT75O95678 551 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 RLN2P04090 185 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 GIG44P09565 113 aaPredicted RBP4.25□□□□□ -1.73
PCF11-202ENST00000528336 KRTAP1-4P0C5Y4 121 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 ZDHHC11BP0C7U3 371 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 HIST1H1EP10412 219 aaKnown RBP4.25□□□□□ -1.73
PCF11-202ENST00000528336 UGT2B7P16662 529 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 RAB5AP20339 215 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 GSSP48637 474 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 CDK9P50750 372 aaKnown RBP4.25□□□□□ -1.73
PCF11-202ENST00000528336 FABP6P51161 128 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 RORCP51449 518 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 UBE2E1P51965 193 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 SNRPFP62306 86 aaKnown RBP4.25□□□□□ -1.73
PCF11-202ENST00000528336 DEFB103AP81534 67 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 SEMG2Q02383 582 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 TNFRSF9Q07011 255 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 KRR1Q13601 381 aaKnown RBP4.25□□□□□ -1.73
PCF11-202ENST00000528336 PRPSAP1Q14558 356 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 TRAM1Q15629 374 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 ATP6AP1Q15904 470 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 FAM27D1Q5T7N8 215 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 TMEM42Q69YG0 159 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 CGB2Q6NT52 195 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 PRSS41Q7RTY9 318 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 FAM19A5Q7Z5A7 132 aaPredicted RBP4.25□□□□□ -1.73
PCF11-202ENST00000528336 TMEM150AQ86TG1 271 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 CPNE9Q8IYJ1 553 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 LGI3Q8N145 548 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 PNKDQ8N490 385 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 ACOT4Q8N9L9 421 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 OR10Z1Q8NGY1 313 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 RCN3Q96D15 328 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 MS4A14Q96JA4 679 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 UBE2E2Q96LR5 201 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 HES7Q9BYE0 225 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 TRABDQ9H4I3 376 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 REEP1Q9H902 201 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 FBXO8Q9NRD0 319 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 IMPAD1Q9NX62 359 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 TP53TG1Q9Y2A0 90 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 TET1Q8NFU7 2136 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 SIP14410 1827 aa4.25□□□□□ -1.73
PCF11-202ENST00000528336 A0A1W2PRG6 482 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 M0R1B8 84 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 FAM189A1O60320 539 aa4.24□□□□□ -1.73
PCF11-202ENST00000528336 ICOSLGO75144 302 aa4.24□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms