RNA–Protein interactions for RNA: ENST00000527323.5

CAPN1-208, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-208ENST00000527323 RELNP78509 3460 aa10.9□□□□□ -0.66
CAPN1-208ENST00000527323 MYO7BQ6PIF6 2116 aa10.9□□□□□ -0.66
CAPN1-208ENST00000527323 AP4M1O00189 453 aa10.9□□□□□ -0.66
CAPN1-208ENST00000527323 EIF1BO60739 113 aaKnown RBP10.9□□□□□ -0.66
CAPN1-208ENST00000527323 DHRS3O75911 302 aa10.9□□□□□ -0.66
CAPN1-208ENST00000527323 EIF2S3P41091 472 aaKnown RBP10.9□□□□□ -0.66
CAPN1-208ENST00000527323 EIF1P41567 113 aaKnown RBP10.9□□□□□ -0.66
CAPN1-208ENST00000527323 SOHLH1Q5JUK2 328 aa10.9□□□□□ -0.66
CAPN1-208ENST00000527323 ANKRD37Q7Z713 158 aa10.9□□□□□ -0.66
CAPN1-208ENST00000527323 GJC3Q8NFK1 279 aa10.9□□□□□ -0.66
CAPN1-208ENST00000527323 SSC4DQ8WTU2 575 aa10.9□□□□□ -0.66
CAPN1-208ENST00000527323 SLC25A43Q8WUT9 341 aaPredicted RBP10.9□□□□□ -0.66
CAPN1-208ENST00000527323 HAS2Q92819 552 aa10.9□□□□□ -0.66
CAPN1-208ENST00000527323 RBM24Q9BX46 236 aaKnown RBP10.9□□□□□ -0.66
CAPN1-208ENST00000527323 OR51M1Q9H341 326 aa10.9□□□□□ -0.66
CAPN1-208ENST00000527323 TUBA4BQ9H853 241 aa10.9□□□□□ -0.66
CAPN1-208ENST00000527323 TRBV23-1A0A0A0MS06 115 aa10.9□□□□□ -0.67
CAPN1-208ENST00000527323 FOXI3A8MTJ6 420 aaPredicted RBP10.9□□□□□ -0.67
CAPN1-208ENST00000527323 CDX4O14627 284 aaPredicted RBP10.9□□□□□ -0.67
CAPN1-208ENST00000527323 IFNA17P01571 189 aa10.9□□□□□ -0.67
CAPN1-208ENST00000527323 CELA2AP08217 269 aa10.9□□□□□ -0.67
CAPN1-208ENST00000527323 DBHP09172 617 aa10.9□□□□□ -0.67
CAPN1-208ENST00000527323 RD3LP0DJH9 198 aa10.9□□□□□ -0.67
CAPN1-208ENST00000527323 MSX1P28360 303 aa10.9□□□□□ -0.67
CAPN1-208ENST00000527323 RPS10P46783 165 aaKnown RBP10.9□□□□□ -0.67
CAPN1-208ENST00000527323 P2RY1P47900 373 aa10.9□□□□□ -0.67
CAPN1-208ENST00000527323 LILRB2Q8N423 598 aa10.9□□□□□ -0.67
CAPN1-208ENST00000527323 TMEM156Q8N614 296 aa10.9□□□□□ -0.67
CAPN1-208ENST00000527323 PP6455Q8WZ26 134 aa10.9□□□□□ -0.67
CAPN1-208ENST00000527323 NAA60Q9H7X0 242 aa10.9□□□□□ -0.67
CAPN1-208ENST00000527323 NECAP2Q9NVZ3 263 aa10.9□□□□□ -0.67
CAPN1-208ENST00000527323 CCDC163A0A0D9SF12 145 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 SPRY1O43609 319 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-208ENST00000527323 CLN5O75503 358 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 OR2C1O95371 312 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 CSNK1A1P48729 337 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 PPA1Q15181 289 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 SUMF2Q8NBJ7 301 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 AKR7LQ8NHP1 331 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 SLC22A8Q8TCC7 542 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 TAAR9Q96RI9 348 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 TM2D1Q9BX74 207 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 METTL9Q9H1A3 318 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 LIME1Q9H400 295 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 SEBOXQ9HB31 216 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-208ENST00000527323 PLEK2Q9NYT0 353 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 AK3Q9UIJ7 227 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 ST8SIA3O43173 380 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 OR2J2O76002 312 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 OR8U8P0C7N1 319 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 MSR1P21757 451 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 CHATP28329 748 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 PPP1CCP36873 323 aaKnown RBP10.89□□□□□ -0.67
CAPN1-208ENST00000527323 ZNF84P51523 738 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 ZNF133P52736 654 aaPredicted RBP10.89□□□□□ -0.67
CAPN1-208ENST00000527323 PRSS12P56730 875 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 MEX3BQ6ZN04 569 aaKnown RBP10.89□□□□□ -0.67
CAPN1-208ENST00000527323 LURAP1LQ8IV03 231 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 OR52M1Q8NGK5 317 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 OR5L2Q8NGL0 311 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 SLC39A7Q92504 469 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 DYRK2Q92630 601 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 SLAMF9Q96A28 289 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 DUSP23Q9BVJ7 150 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 TMUB1Q9BVT8 246 aa10.89□□□□□ -0.67
CAPN1-208ENST00000527323 TMEM187Q14656 261 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 CLINT1Q14677 625 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 GNMTQ14749 295 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 GPR157Q5UAW9 335 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 PRAMEF20Q5VT98 475 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 CRIP3Q6Q6R5 217 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 LINC00469Q8N7U9 141 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 GNRHR2Q96P88 292 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 RARRES2Q99969 163 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 WDR77Q9BQA1 342 aaPredicted RBP10.88□□□□□ -0.67
CAPN1-208ENST00000527323 GINS3Q9BRX5 216 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 CHST5Q9GZS9 411 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 ZNF581Q9P0T4 197 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 STRAPQ9Y3F4 350 aaKnown RBP10.88□□□□□ -0.67
CAPN1-208ENST00000527323 NSG1A0A0A6YYJ2 146 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 SPAARA0A1B0GVQ0 90 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 RRP8O43159 456 aaKnown RBP10.88□□□□□ -0.67
CAPN1-208ENST00000527323 PHF1O43189 567 aaPredicted RBP10.88□□□□□ -0.67
CAPN1-208ENST00000527323 CER1O95813 267 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 DUSP1P28562 367 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 ALDH3B1P43353 468 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 BPIFB3P59826 476 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 RHEBQ15382 184 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 ACER2Q5QJU3 275 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 SLC23A3Q6PIS1 610 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 DTX1Q86Y01 620 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 NFAM1Q8NET5 270 aaPredicted RBP10.88□□□□□ -0.67
CAPN1-208ENST00000527323 PARD6AQ9NPB6 346 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 RCL1Q9Y2P8 373 aaKnown RBP10.88□□□□□ -0.67
CAPN1-208ENST00000527323 COL12A1Q99715 3063 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 M0R135 149 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 OMGP23515 440 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 HOXA6P31267 233 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 RAB5CP51148 216 aa10.88□□□□□ -0.67
CAPN1-208ENST00000527323 RAB2AP61019 212 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms