RNA–Protein interactions for RNA: ENST00000527299.1

CLNS1A-209, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 387 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-209ENST00000527299 RAI2Q9Y5P3 530 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 DNAJC15Q9Y5T4 150 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 RFNGQ9Y644 331 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 NYNRINQ9P2P1 1898 aaKnown RBP3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 LY75O60449 1722 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 NINQ8N4C6 2090 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 ATG2AQ2TAZ0 1938 aa3.21□□□□□ -1.9
CLNS1A-209ENST00000527299 ROBO1Q9Y6N7 1651 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 DSPPQ9NZW4 1301 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 LOC100509620A0A075B734 347 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 IGHV2-26A0A0B4J1V2 119 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 A0A0G2JK05 382 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 A0A0J9YY10 115 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 A0A1B0GX78 115 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 IGLC7A0M8Q6 106 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 C9JVG2 144 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 G3V3Y1 287 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 PYCARD-AS1I3L0S3 204 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 PIRO00625 290 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 HNRNPDLO14979 420 aaKnown RBP3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 EDIL3O43854 480 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 TMPRSS11DO60235 418 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 FCMRO60667 390 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 LRP3O75074 770 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 CDS2O95674 445 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 TRUB2O95900 331 aaKnown RBP3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 TBX6O95947 436 aaPredicted RBP3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 GBAP04062 536 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 ATP1B1P05026 303 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 CSN2P05814 226 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 IL3P08700 152 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 IGLC1P0CG04 106 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 MPC1LP0DKB6 136 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 LYL1P12980 280 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 CEACAM1P13688 526 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 CTSEP14091 401 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 GNB3P16520 340 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 AMD1P17707 334 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 EN2P19622 333 aaPredicted RBP3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 ARL2P36404 184 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 CTRLP40313 264 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 FASLGP48023 281 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 HNRNPA3P51991 378 aaKnown RBP3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 LOXL3P58215 753 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 TAS2R43P59537 309 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 RPL23AP62750 156 aaKnown RBP3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 SELENOWP63302 87 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 PAFAH1B2P68402 229 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 B4GALNT1Q00973 533 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 RAB40BQ12829 278 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 GAGE5Q13069 117 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 GAGE6Q13070 117 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 OLIG2Q13516 323 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 PMS2P11Q13670 270 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 ENDOGQ14249 297 aaKnown RBP3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 GNMTQ14749 295 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 KIAA0040Q15053 153 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 RGNQ15493 299 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 PCK2Q16822 640 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 AMZ1Q400G9 498 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 TRMT12Q53H54 448 aaKnown RBP3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 SOHLH1Q5JUK2 328 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 C1orf189Q5VU69 101 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 SFXN4Q6P4A7 337 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 GGT6Q6P531 493 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 DNM1P46Q6ZS02 220 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 BCDIN3DQ7Z5W3 292 aaKnown RBP3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 ACOT1Q86TX2 421 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 WDR5BQ86VZ2 330 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 C17orf64Q86WR6 236 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF280BQ86YH2 543 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 DOLPP1Q86YN1 238 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 MSRB3Q8IXL7 192 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 KLHDC8AQ8IYD2 350 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF567Q8N184 647 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 C2orf73Q8N5S3 287 aaPredicted RBP3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 SLC5A8Q8N695 610 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 PNPLA1Q8N8W4 532 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 C5orf17Q8NAS9 161 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 ZNF485Q8NCK3 441 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 OR4K17Q8NGC6 315 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 OR4N2Q8NGD1 307 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 OR51A2Q8NGJ7 313 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 OR2Y1Q8NGV0 311 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 OR6K2Q8NGY2 324 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 OR52E5Q8NH55 327 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 RHEBL1Q8TAI7 183 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 TMEM170AQ8WVE7 144 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 SKA2Q8WVK7 121 aaPredicted RBP3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 SOCS4Q8WXH5 440 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 GALMQ96C23 342 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 IMP4Q96G21 291 aaKnown RBP3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 CAPNS2Q96L46 248 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 GPR82Q96P67 336 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 MCEEQ96PE7 176 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 TSPAN32Q96QS1 320 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 ACCSQ96QU6 501 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 HIST1H2AAQ96QV6 131 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 OR6C1Q96RD1 312 aa3.2□□□□□ -1.9
CLNS1A-209ENST00000527299 GABRG3Q99928 467 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms