RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 FSTP19883 344 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 PAX6P26367 422 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 MAPK3P27361 379 aaPredicted RBP3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 EDDM3BP56851 147 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 FGF12P61328 243 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 ARF6P62330 175 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 IL13RA1P78552 427 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 KLRD1Q13241 179 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 GPR50Q13585 617 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 ATXN7L3Q14CW9 347 aaPredicted RBP3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 RSU1Q15404 277 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 TAF9Q16594 264 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 SMIM21Q3B7S5 101 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 FAM120AOSQ5T036 256 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 SYT6Q5T7P8 510 aaPredicted RBP3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 METTL11BQ5VVY1 283 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 RUSC1-AS1Q66K80 236 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 C17orf107Q6ZR85 190 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 NLRC3Q7RTR2 1065 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 SLC36A1Q7Z2H8 476 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 C5orf24Q7Z6I8 188 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 BIVMQ86UB2 503 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 GLCCI1Q86VQ1 547 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 LYPD6Q86Y78 171 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 FAM185AQ8N0U4 392 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 PNKDQ8N490 385 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 DTX3Q8N9I9 347 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 OR4S1Q8NGB4 309 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 OR51D1Q8NGF3 324 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 UBALD1Q8TB05 177 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 DYRK2Q92630 601 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 FCGR1BQ92637 280 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 YIPF6Q96EC8 236 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 S100A13Q99584 98 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 NUDT16L1Q9BRJ7 211 aaKnown RBP3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 NICN1Q9BSH3 213 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 PCGF1Q9BSM1 259 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 TMPRSS13Q9BYE2 586 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 SELENOIQ9C0D9 397 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 SLITRK2Q9H156 845 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 METTL9Q9H1A3 318 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 C7orf69Q9H7B7 122 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 PLGRKTQ9HBL7 147 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 HES4Q9HCC6 221 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 C19orf12Q9NSK7 152 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 ONECUT1Q9UBC0 465 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 SLC25A10Q9UBX3 287 aaPredicted RBP3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 OR5V1Q9UGF6 321 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 KCNS2Q9ULS6 477 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 STUB1Q9UNE7 303 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 SSR3Q9UNL2 185 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 FOXJ3Q9UPW0 622 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 ST3GAL6Q9Y274 331 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 NOTCH2Q04721 2471 aa3.81□□□□□ -1.8
CHMP4A-202ENST00000524955 ANKRD17O75179 2603 aaKnown RBP3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 PPIAL4CA0A0B4J2A2 164 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 IGHV2-70DA0A0C4DH43 119 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 A0A0G2JK05 382 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 MDFIC2A0A1B0GVS7 189 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 TRDV1A0A1B0GX56 115 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 A0A1W2PQ09 198 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 UBE2QL1A1L167 161 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 FAM172BPA6NC97 362 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 TRIM64CA6NLI5 447 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 SLC33A1O00400 549 aaPredicted RBP3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 SH2D1BO14796 132 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 GEMIN2O14893 280 aaKnown RBP3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 DEGS1O15121 323 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 FOXH1O75593 365 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 ARL6IP5O75915 188 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 OR7C1O76099 320 aaPredicted RBP3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 ALX3O95076 343 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 IGHV3-7P01780 117 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 TK1P04183 234 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 ALDOBP05062 364 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 TFAP2AP05549 437 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 CHRM2P08172 466 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 PPIAL4GP0DN37 164 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 VSIG8P0DPA2 414 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 SNRPBP14678 240 aaKnown RBP3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 MGMTP16455 207 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 JUNBP17275 347 aaPredicted RBP3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 RAB3BP20337 219 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 MYL9P24844 172 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 PSMA1P25786 263 aaKnown RBP3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 HTR2CP28335 458 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 SDC2P34741 201 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 OR3A1P47881 315 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 GLIPR1P48060 266 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 EFNB2P52799 333 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 DVL1P1P54792 670 aaPredicted RBP3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 VBP1P61758 197 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 NCS1P62166 190 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 PAX2Q02962 417 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 AESQ08117 197 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 MADCAM1Q13477 382 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 ZNF273Q14593 569 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 TRAM1Q15629 374 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 GRK1Q15835 563 aa3.8□□□□□ -1.8
CHMP4A-202ENST00000524955 KCNJ8Q15842 424 aa3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms