RNA–Protein interactions for RNA: ENST00000524895.5

TSPAN4-213, Transcript of tetraspanin 4, humanhuman

TSL 4

Gene TSPAN4, Length 401 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-213ENST00000524895 A0A0A6YYD4 124 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 FAM90A10PA6NDY2 464 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 FAM90A18PA6NE21 464 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 FAM90A16PA6NEW6 464 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 FAM90A20PA6NIJ5 464 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 FAM90A8PA6NJQ4 464 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 FAM90A7PA6NKC0 464 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 OR2AT4A6NND4 320 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 FAM90A22PA8MWA6 464 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 FAM90A12PA8MX19 464 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 FAM90A5PA8MXJ8 464 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 FAM90A23PA8MXZ1 464 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 LGALS8O00214 317 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 SSX4O60224 188 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 OR7C1O76099 320 aaPredicted RBP13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 CHRM2P08172 466 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 FAM90A15PP0C7V4 464 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 FAM90A13PP0C7W8 464 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 FAM90A14PP0C7W9 464 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 FAM90A24PP0C7X0 464 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 PAX1P15863 534 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 MUC1P15941 1255 aaPredicted RBP13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 DUSP1P28562 367 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 ZNF146Q15072 292 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 MPV17LQ2QL34 196 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 TEX36Q5VZQ5 186 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 RAB12Q6IQ22 244 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 CNIH2Q6PI25 160 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 METAP1DQ6UB28 335 aaPredicted RBP13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 BIVMQ86UB2 503 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 DEFB108BQ8NET1 73 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 TIMD4Q96H15 378 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 DIRAS2Q96HU8 199 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 DIABLOQ9NR28 239 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 EXTL2Q9UBQ6 330 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 WIPI2Q9Y4P8 454 aa13.29□□□□□ -0.28
TSPAN4-213ENST00000524895 A0A0A6YYH2 397 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 TRAV38-1A0A0B4J264 116 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 A6NJ64 397 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 SH2D1BO14796 132 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 PPIHO43447 177 aaKnown RBP13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 HAND1O96004 215 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 ZNF44P15621 663 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 CDK2P24941 298 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 TNFSF8P32971 234 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 BTG1P62324 171 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 SCN1BQ07699 218 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 PDCD1Q15116 288 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 TMEM69Q5SWH9 247 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 FAM89BQ8N5H3 189 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 ZNF525Q8N782 197 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 CHST4Q8NCG5 386 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 OR4M1Q8NGD0 313 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 OR5T2Q8NGG2 359 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 OR10R2Q8NGX6 335 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 RAB1CQ92928 201 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 POM121Q96HA1 1249 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 GSX2Q9BZM3 304 aa13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 BEX4Q9NWD9 120 aaPredicted RBP13.28□□□□□ -0.28
TSPAN4-213ENST00000524895 ISPDA4D126 451 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 RFPL4AA6NLU0 287 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 RFPL4AL1F8VTS6 287 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 H3BUI4 141 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 SIRPB1O00241 398 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 DEGS1O15121 323 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 SOCS1O15524 211 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 PSG2P11465 335 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 BLVRBP30043 206 aaPredicted RBP13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 CEBPDP49716 269 aaPredicted RBP13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 TMEM33P57088 247 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 MADCAM1Q13477 382 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 ZMYND11Q15326 602 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 KCNJ8Q15842 424 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 MOGAT2Q3SYC2 334 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 NKAPLQ5M9Q1 402 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 SPANXN2Q5MJ10 180 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 ATAD3CQ5T2N8 411 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 AVPI1Q5T686 147 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 STUMQ69YW2 141 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 LINC00299Q6ZSB3 139 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 IZUMO1Q8IYV9 350 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 DTX3Q8N9I9 347 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 RAB3CQ96E17 227 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 NEDD4LQ96PU5 975 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 SPACA1Q9HBV2 294 aa13.27□□□□□ -0.29
TSPAN4-213ENST00000524895 IGKV1D-17A0A075B6S4 117 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 NKX6-3A6NJ46 265 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 RAB27BO00194 218 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 XRCC3O43542 346 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 PDCD6O75340 191 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 OR2H2O95918 312 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 GYPAP02724 150 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 PRDX2P32119 198 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 MDH2P40926 338 aaKnown RBP13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 GPR6P46095 362 aaPredicted RBP13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 GABRA2P47869 451 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 PDLIM4P50479 330 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 DEFB113Q30KQ7 82 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 Q6P435 159 aa13.26□□□□□ -0.29
TSPAN4-213ENST00000524895 BAIAP2L2Q6UXY1 529 aa13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms