RNA–Protein interactions for RNA: ENST00000524773.5

CAPN1-202, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-202ENST00000524773 TGIF2Q9GZN2 237 aa11.46□□□□□ -0.58
CAPN1-202ENST00000524773 NAA60Q9H7X0 242 aa11.46□□□□□ -0.58
CAPN1-202ENST00000524773 AKIRIN1Q9H9L7 192 aaPredicted RBP11.46□□□□□ -0.58
CAPN1-202ENST00000524773 IGSF23A1L1A6 192 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 ZNF724A8MTY0 619 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 PAX6P26367 422 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 CHATP28329 748 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 UBE2KP61086 200 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 DLK1P80370 383 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 EWSR1Q01844 656 aaKnown RBP eCLIP11.45□□□□□ -0.58
CAPN1-202ENST00000524773 COL19A1Q14993 1142 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 CXorf66Q5JRM2 361 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-202ENST00000524773 SLC25A47Q6Q0C1 308 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 DMRTC2Q8IXT2 367 aaPredicted RBP11.45□□□□□ -0.58
CAPN1-202ENST00000524773 TMEM123Q8N131 208 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 MUCL1Q96DR8 90 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 GINS3Q9BRX5 216 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 FGF21Q9NSA1 209 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 FAM186AA6NE01 2351 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 GDF9O60383 454 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 GPR137BO60478 399 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 HEXBP07686 556 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 CELA2AP08217 269 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 SEC11BP0C7V7 166 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 GAMTQ14353 236 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 RSU1Q15404 277 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 IZUMO4Q1ZYL8 232 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 PLPPR5Q32ZL2 321 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 ST8SIA1Q92185 356 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 ZDHHC12Q96GR4 267 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 NUDT16L1Q9BRJ7 211 aaKnown RBP11.45□□□□□ -0.58
CAPN1-202ENST00000524773 P4HTMQ9NXG6 502 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 PLEK2Q9NYT0 353 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 KCNIP3Q9Y2W7 256 aa11.45□□□□□ -0.58
CAPN1-202ENST00000524773 STARD6P59095 220 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 CLEC12BQ2HXU8 276 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 LMAN1LQ9HAT1 526 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 PLEKHA2Q9HB19 425 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 SDHAF3Q9NRP4 125 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 MMP17Q9ULZ9 603 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 POMT1Q9Y6A1 747 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 TNRC18O15417 2968 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-202ENST00000524773 RBFOX3A6NFN3 312 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 SERPINE3A8MV23 424 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 HIST1H2BKO60814 126 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 HIST1H2BJP06899 126 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 FABP4P15090 132 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 HOXA5P20719 270 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 HIST1H2BOP23527 126 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 S100A2P29034 98 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 HIST1H2BBP33778 126 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 HIST1H2BDP58876 126 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 HIST1H2BCP62807 126 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 SURF2Q15527 256 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-202ENST00000524773 HMGN3Q15651 99 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 HIST2H2BEQ16778 126 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.44□□□□□ -0.58
CAPN1-202ENST00000524773 HIST1H2BHQ93079 126 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 HIST1H2BNQ99877 126 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 HIST1H2BMQ99879 126 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 TCEAL7Q9BRU2 100 aa11.44□□□□□ -0.58
CAPN1-202ENST00000524773 K7N7A8 449 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 SLC34A2O95436 690 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 DEFA6Q01524 100 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 ELOBQ15370 118 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 SPIN3Q5JUX0 258 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 SPSB3Q6PJ21 355 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 FBXL14Q8N1E6 418 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 YPEL4Q96NS1 127 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 SUCNR1Q9BXA5 334 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 GLRX2Q9NS18 164 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 IGKV1-12A0A0C4DH73 117 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 ST8SIA3O43173 380 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 DHRS3O75911 302 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 IGKV1D-12P01611 117 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 AADACP22760 399 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 RAB5CP51148 216 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 RHEBQ15382 184 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 ZNF468Q5VIY5 522 aaPredicted RBP11.43□□□□□ -0.58
CAPN1-202ENST00000524773 HAS2Q92819 552 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 MSI2Q96DH6 328 aaKnown RBP11.43□□□□□ -0.58
CAPN1-202ENST00000524773 Q96M66 194 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 CHST5Q9GZS9 411 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 ARV1Q9H2C2 271 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 TUBA4BQ9H853 241 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 GAR1Q9NY12 217 aaKnown RBP11.43□□□□□ -0.58
CAPN1-202ENST00000524773 A0A1B0GX78 115 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 HSD17B6O14756 317 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 PPA1Q15181 289 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 ZNF429Q86V71 674 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 OR10AD1Q8NGE0 317 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 OR5C1Q8NGR4 320 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 SSX3Q99909 188 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 PBDC1Q9BVG4 233 aa11.43□□□□□ -0.58
CAPN1-202ENST00000524773 M0R135 149 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 TMEM50AO95807 157 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 CDX1P47902 265 aaPredicted RBP11.42□□□□□ -0.58
CAPN1-202ENST00000524773 CCR5P51681 352 aa11.42□□□□□ -0.58
CAPN1-202ENST00000524773 AFF3P51826 1226 aaKnown RBP11.42□□□□□ -0.58
CAPN1-202ENST00000524773 ZNF154Q13106 437 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms