RNA–Protein interactions for RNA: ENST00000523752.5

TNFRSF10B-208, Transcript of TNF receptor superfamily member 10b, humanhuman

TSL 1 (best)

Gene TNFRSF10B, Length 3,328 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-208ENST00000523752 PARP11Q9NR21 331 aa6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 DECR2Q9NUI1 292 aa6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 C9J4A7 227 aa6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 TOX3O15405 576 aaPredicted RBP6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 SNRNP70P08621 437 aaKnown RBP6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 LIFP15018 202 aa6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 B4GALT1P15291 398 aa6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 CBR1P16152 277 aa6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 OMGP23515 440 aa6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 OTX2P32243 289 aa6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 TMEM187Q14656 261 aa6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 DAZAP2Q15038 168 aaPredicted RBP6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 PEA15Q15121 130 aa6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 Q6ZSR3 168 aa6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 FGFBP3Q8TAT2 258 aa6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 RTN4IP1Q8WWV3 396 aaPredicted RBP6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 IP6K3Q96PC2 410 aa6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 OR51B6Q9H340 312 aa6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 RPS10P5Q9NQ39 176 aa6.95□□□□□ -1.3
TNFRSF10B-208ENST00000523752 WRBO00258 174 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 OR7C1O76099 320 aaPredicted RBP6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 TSPAN15O95858 294 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 S100A9P06702 114 aaKnown RBP6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 CHATP28329 748 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 HERV-K104P61576 105 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 NHLH2Q02577 135 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 SLC22A25Q6T423 547 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 PLXDC2Q6UX71 529 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 MAML2Q8IZL2 1156 aaPredicted RBP6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 HSD17B11Q8NBQ5 300 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 LYPD6BQ8NI32 183 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 SFT2D1Q8WV19 159 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 HPSE2Q8WWQ2 592 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 PIGCQ92535 297 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 BORCS8Q96FH0 119 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 GPHA2Q96T91 129 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 PRRG4Q9BZD6 226 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 CRLF2Q9HC73 371 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 IGHV1-45A0A0A0MS14 117 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 A0A1W2PPE3 182 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 SYNGR3O43761 229 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 EIF3GO75821 320 aaKnown RBP eCLIP6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 JTBO76095 146 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 GAPDHP04406 335 aaKnown RBP6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 ZNF728P0DKX0 622 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 EPHA8P29322 1005 aaPredicted RBP6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 CAMLGP49069 296 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 ZNF133P52736 654 aaPredicted RBP6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 DVL1P1P54792 670 aaPredicted RBP6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 YRDCQ86U90 279 aaKnown RBP6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 FBXL14Q8N1E6 418 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 NAA60Q9H7X0 242 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 BIN3Q9NQY0 253 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 SLC2A9Q9NRM0 540 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 RCL1Q9Y2P8 373 aaKnown RBP6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 MUC6Q6W4X9 2439 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 PTPRZ1P23471 2315 aaPredicted RBP6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 ZNF407Q9C0G0 2248 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 FREM1Q5H8C1 2179 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 K7ESF4 209 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 SGCEO43556 437 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 COX6A1P12074 109 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 SNRPEP62304 92 aaKnown RBP6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 AWAT1Q58HT5 328 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 UBAC2Q8NBM4 344 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 SPTSSAQ969W0 71 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 SLAMF9Q96A28 289 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 USB1Q9BQ65 265 aaKnown RBP6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 METTL9Q9H1A3 318 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 RGCCQ9H4X1 137 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 WNT16Q9UBV4 365 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 STARD10Q9Y365 291 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 TIMM10BQ9Y5J6 103 aa6.94□□□□□ -1.3
TNFRSF10B-208ENST00000523752 TERTO14746 1132 aaKnown RBP6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 CA11O75493 328 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 ACAA1P09110 424 aaPredicted RBP6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 ZNF32P17041 273 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 SNCAP37840 140 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 GLP1RP43220 463 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 HTR5AP47898 357 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 EIF3IQ13347 325 aaKnown RBP6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 ANKRD39Q53RE8 183 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 FAM27BQ5VT28 67 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 OPN5Q6U736 354 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 RBMS3Q6XE24 437 aaKnown RBP6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 GPR137CQ8N3F9 429 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 HIST1H2BAQ96A08 127 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 INTS12Q96CB8 462 aaKnown RBP6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 MSI2Q96DH6 328 aaKnown RBP6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 TP53RKQ96S44 253 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 LRFN3Q9BTN0 628 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 NECAP2Q9NVZ3 263 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 HS3ST3B1Q9Y662 390 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 A6NLC8 198 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 ZNF587BE7ETH6 402 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 KLF7O75840 302 aaPredicted RBP6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 ONECUT2O95948 504 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 NR2C1P13056 603 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 CCL4P13236 92 aa6.93□□□□□ -1.3
TNFRSF10B-208ENST00000523752 HOXB1P14653 301 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms