RNA–Protein interactions for RNA: ENST00000522557.1

HMGB1P1-201, Transcript of high mobility group box 1 pseudogene 1, humanhuman

BASIC

Gene HMGB1P1, Length 636 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P1-201ENST00000522557 OR2L8Q8NGY9 312 aa2.63□□□□□ -1.99
HMGB1P1-201ENST00000522557 LRRC20Q8TCA0 184 aa2.63□□□□□ -1.99
HMGB1P1-201ENST00000522557 NT5CQ8TCD5 201 aa2.63□□□□□ -1.99
HMGB1P1-201ENST00000522557 CDKL2Q92772 493 aa2.63□□□□□ -1.99
HMGB1P1-201ENST00000522557 ADTRPQ96IZ2 230 aa2.63□□□□□ -1.99
HMGB1P1-201ENST00000522557 TIMM29Q9BSF4 260 aa2.63□□□□□ -1.99
HMGB1P1-201ENST00000522557 COA1Q9GZY4 146 aa2.63□□□□□ -1.99
HMGB1P1-201ENST00000522557 RHBDL2Q9NX52 303 aa2.63□□□□□ -1.99
HMGB1P1-201ENST00000522557 NXT1Q9UKK6 140 aaKnown RBP2.63□□□□□ -1.99
HMGB1P1-201ENST00000522557 AP3M1Q9Y2T2 418 aa2.63□□□□□ -1.99
HMGB1P1-201ENST00000522557 THSD7AQ9UPZ6 1657 aa2.63□□□□□ -1.99
HMGB1P1-201ENST00000522557 TULP4Q9NRJ4 1543 aa2.63□□□□□ -1.99
HMGB1P1-201ENST00000522557 ANKRD36BQ8N2N9 1353 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 FMN2Q9NZ56 1722 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 IGLV4-60A0A075B6I1 120 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 TRAV8-6A0A0B4J262 113 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 IGHV1-3A0A0C4DH29 117 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 IGKV1-6A0A0C4DH72 117 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 SLC5A10A0PJK1 596 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 A8MUU9 505 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 HLA-DQB1P01920 261 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 PSMB5P28074 263 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 PRSS3P35030 304 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 MTPNP58546 118 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 GUSBP1Q15486 140 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 DEFB115Q30KQ5 88 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 Q6ZT83 130 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 ERO1BQ86YB8 467 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 CDRT4Q8N9R6 151 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 ST20-AS1Q8NBB2 130 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 OR6K2Q8NGY2 324 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 SFXN5Q8TD22 340 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 ALS2CR12Q96Q35 445 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 DOK1Q99704 481 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 ACBD6Q9BR61 282 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 PLEKHA1Q9HB21 404 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 SND1-IT1Q9HBX3 110 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 ACOT13Q9NPJ3 140 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 FARSAQ9Y285 508 aaKnown RBP2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 CBY1Q9Y3M2 126 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 PLCH1Q4KWH8 1693 aa2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 BAZ2AQ9UIF9 1905 aaKnown RBP2.62□□□□□ -1.99
HMGB1P1-201ENST00000522557 ADCY9O60503 1353 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 NSD3Q9BZ95 1437 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 TMEM72A0PK05 275 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 MGAT4DA6NG13 374 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 GOLGA8JA6NMD2 632 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 ZNF850A8MQ14 1090 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 MYL12BO14950 172 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 IGKV1-39P01597 117 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 IGKV1D-39P04432 117 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 GOLGA8HP0CJ92 632 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 DNASE1L1P49184 302 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 RGS6P49758 472 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 OR12D2P58182 307 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 YIF1BQ5BJH7 314 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 TTC32Q5I0X7 151 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 ZNF880Q6PDB4 577 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 MORN3Q6PF18 240 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 MDP1Q86V88 176 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 H1FOOQ8IZA3 346 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 OR13G1Q8NGZ3 307 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 OR1S1Q8NH92 325 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 SYNPRQ8TBG9 265 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 TBL1YQ9BQ87 522 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 OR52A5Q9H2C5 316 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 MRM2Q9UI43 246 aaKnown RBP2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 MAP3K19Q56UN5 1328 aa2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 RGPD8O14715 1765 aaPredicted RBP2.61□□□□□ -1.99
HMGB1P1-201ENST00000522557 CPSF1Q10570 1443 aaKnown RBP2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 MYOM1P52179 1685 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 F8VP50 259 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 LGALS9O00182 355 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 PLPP3O14495 311 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 CDIPTO14735 213 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 NTF3P20783 257 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 PRKACBP22694 351 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 PMELP40967 661 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 KRTAP13-2Q52LG2 175 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 SYT6Q5T7P8 510 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 AP1ARQ63HQ0 302 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 BBS7Q8IWZ6 715 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 SPICQ8N5J4 248 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 RNF10Q8N5U6 811 aaKnown RBP2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 LRRC52Q8N7C0 313 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 TRIML2Q8N7C3 387 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 ZNF709Q8N972 641 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 OR4K2Q8NGD2 314 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 OR52N1Q8NH53 320 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 DEDD2Q8WXF8 326 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 STARD4Q96DR4 205 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 SNF8Q96H20 258 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 OR10C1Q96KK4 312 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 ZNF75AQ96N20 296 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 ZFP3Q96NJ6 502 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 FRMD8P1Q9BZ68 369 aaPredicted RBP2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 LINC00574Q9H8X3 128 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 C21orf62Q9NYP8 219 aa2.6□□□□□ -1.99
HMGB1P1-201ENST00000522557 NUP188Q5SRE5 1749 aa2.59□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms