RNA–Protein interactions for RNA: ENST00000522240.1

CPNE3-205, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 446 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-205ENST00000522240 H3BUI4 141 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 TPD52L2O43399 206 aaKnown RBP11.01□□□□□ -0.65
CPNE3-205ENST00000522240 NXPH2O95156 264 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 PRKACAP17612 351 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 PITPNBP48739 271 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 TAS2R20P59543 309 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 CCL8P80075 99 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 MRPS10P82664 201 aaKnown RBP11.01□□□□□ -0.65
CPNE3-205ENST00000522240 PITPNAQ00169 270 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 IL18Q14116 193 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 ARL6IP1Q15041 203 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 ZNF79Q15937 498 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 SMIM21Q3B7S5 101 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 SPRNQ5BIV9 151 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 SPIN3Q5JUX0 258 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 ZNF826PQ6ZT77 177 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 FAM90A1Q86YD7 464 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 GCSAMQ8N6F7 178 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 OR10R2Q8NGX6 335 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 LRRC29Q8WV35 223 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 NICN1Q9BSH3 213 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 SRRQ9GZT4 340 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 RAB1BQ9H0U4 201 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 PLEKHF2Q9H8W4 249 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 RNF7Q9UBF6 113 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 PPP1R3CQ9UQK1 317 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 ST3GAL6Q9Y274 331 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 PLEKHA6Q9Y2H5 1048 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 NPTNQ9Y639 398 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 CSMD1Q96PZ7 3565 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 OTOGQ6ZRI0 2925 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 CHD3Q12873 2000 aaKnown RBP11.01□□□□□ -0.65
CPNE3-205ENST00000522240 C2CD3Q4AC94 2353 aa11.01□□□□□ -0.65
CPNE3-205ENST00000522240 HRNRQ86YZ3 2850 aaPredicted RBP11□□□□□ -0.65
CPNE3-205ENST00000522240 LRRC30A6NM36 301 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 F8VVB4 439 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 F8VWA3 439 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 CTDSPLO15194 276 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 KNG1P01042 644 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 LHBP01229 141 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 IRF2P14316 349 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 GLRA1P23415 457 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 PMELP40967 661 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 PTH2RP49190 550 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 VEGFCP49767 419 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 PPP5CP53041 499 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 ZNF146Q15072 292 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 PIGYQ3MUY2 71 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 ACP7Q6ZNF0 438 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 C1orf87Q8N0U7 546 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 GDPD1Q8N9F7 314 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 NEU4Q8WWR8 484 aaPredicted RBP11□□□□□ -0.65
CPNE3-205ENST00000522240 IGFBPL1Q8WX77 278 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 ZNF488Q96MN9 340 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 GAL3ST1Q99999 423 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 CCDC32Q9BV29 185 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 CACNG6Q9BXT2 260 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 IFT22Q9H7X7 185 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 SEBOXQ9HB31 216 aaPredicted RBP11□□□□□ -0.65
CPNE3-205ENST00000522240 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11□□□□□ -0.65
CPNE3-205ENST00000522240 HSF4Q9ULV5 492 aa11□□□□□ -0.65
CPNE3-205ENST00000522240 A0A0G2JMP0 313 aa10.99□□□□□ -0.65
CPNE3-205ENST00000522240 A0A0X1KG70 313 aa10.99□□□□□ -0.65
CPNE3-205ENST00000522240 GEMIN2O14893 280 aaKnown RBP10.99□□□□□ -0.65
CPNE3-205ENST00000522240 SOCS1O15524 211 aa10.99□□□□□ -0.65
CPNE3-205ENST00000522240 PDCD6O75340 191 aa10.99□□□□□ -0.65
CPNE3-205ENST00000522240 RPLP1P05386 114 aaKnown RBP10.99□□□□□ -0.65
CPNE3-205ENST00000522240 GSTP1P09211 210 aaKnown RBP10.99□□□□□ -0.65
CPNE3-205ENST00000522240 HIST1H1DP16402 221 aaKnown RBP10.99□□□□□ -0.65
CPNE3-205ENST00000522240 GABRR1P24046 479 aa10.99□□□□□ -0.65
CPNE3-205ENST00000522240 MRPS11P82912 194 aaKnown RBP10.99□□□□□ -0.65
CPNE3-205ENST00000522240 MOGAT2Q3SYC2 334 aa10.99□□□□□ -0.65
CPNE3-205ENST00000522240 ZNF260Q3ZCT1 412 aa10.99□□□□□ -0.65
CPNE3-205ENST00000522240 ZNF787Q6DD87 383 aa10.99□□□□□ -0.65
CPNE3-205ENST00000522240 ZCCHC24Q8N2G6 241 aaKnown RBP10.99□□□□□ -0.65
CPNE3-205ENST00000522240 OR4M2Q8NGB6 313 aa10.99□□□□□ -0.65
CPNE3-205ENST00000522240 BORCS5Q969J3 196 aa10.99□□□□□ -0.65
CPNE3-205ENST00000522240 RAB3CQ96E17 227 aa10.99□□□□□ -0.65
CPNE3-205ENST00000522240 VRK1Q99986 396 aaPredicted RBP10.99□□□□□ -0.65
CPNE3-205ENST00000522240 SPACA1Q9HBV2 294 aa10.99□□□□□ -0.65
CPNE3-205ENST00000522240 RCC2Q9P258 522 aaKnown RBP10.99□□□□□ -0.65
CPNE3-205ENST00000522240 IL36RNQ9UBH0 155 aa10.99□□□□□ -0.65
CPNE3-205ENST00000522240 LAMP3Q9UQV4 416 aa10.99□□□□□ -0.65
CPNE3-205ENST00000522240 TRAV18A0A075B6X5 111 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 IGHV1-69-2A0A0G2JMI3 117 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.98□□□□□ -0.65
CPNE3-205ENST00000522240 MFNGO00587 321 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 GSTZ1O43708 216 aaPredicted RBP10.98□□□□□ -0.65
CPNE3-205ENST00000522240 CA11O75493 328 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 OR7C1O76099 320 aaPredicted RBP10.98□□□□□ -0.65
CPNE3-205ENST00000522240 HLA-DQB1P01920 261 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 HPXP02790 462 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 MELTFP08582 738 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 EGR1P18146 543 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 CHATP28329 748 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 BLVRBP30043 206 aaPredicted RBP10.98□□□□□ -0.65
CPNE3-205ENST00000522240 TAF9Q16594 264 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 PYDC2Q56P42 97 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 IZUMO1Q8IYV9 350 aa10.98□□□□□ -0.65
CPNE3-205ENST00000522240 BATF2Q8N1L9 274 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms