RNA–Protein interactions for RNA: ENST00000521253.1

TRIM35-203, Transcript of tripartite motif containing 35, humanhuman

TSL 1 (best) BASIC

Gene TRIM35, Length 1,215 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35-203ENST00000521253 VCX3BQ9H321 246 aa16.95■□□□□ 0.3
TRIM35-203ENST00000521253 KDM4BO94953 1096 aa16.94■□□□□ 0.3
TRIM35-203ENST00000521253 HAND1O96004 215 aa16.94■□□□□ 0.3
TRIM35-203ENST00000521253 PRKACAP17612 351 aa16.94■□□□□ 0.3
TRIM35-203ENST00000521253 PRTN3P24158 256 aa16.94■□□□□ 0.3
TRIM35-203ENST00000521253 DUSP1P28562 367 aa16.94■□□□□ 0.3
TRIM35-203ENST00000521253 SNU13P55769 128 aaKnown RBP16.94■□□□□ 0.3
TRIM35-203ENST00000521253 ZP1P60852 638 aa16.94■□□□□ 0.3
TRIM35-203ENST00000521253 ZNF146Q15072 292 aa16.94■□□□□ 0.3
TRIM35-203ENST00000521253 TMEM200BQ69YZ2 307 aa16.94■□□□□ 0.3
TRIM35-203ENST00000521253 METAP1DQ6UB28 335 aaPredicted RBP16.94■□□□□ 0.3
TRIM35-203ENST00000521253 FIP1L1Q6UN15 594 aaKnown RBP16.94■□□□□ 0.3
TRIM35-203ENST00000521253 TNFRSF14Q92956 283 aa16.94■□□□□ 0.3
TRIM35-203ENST00000521253 PGLYRP3Q96LB9 341 aa16.94■□□□□ 0.3
TRIM35-203ENST00000521253 PRDM13Q9H4Q3 707 aa16.94■□□□□ 0.3
TRIM35-203ENST00000521253 METTL8Q9H825 291 aaKnown RBP16.94■□□□□ 0.3
TRIM35-203ENST00000521253 SEBOXQ9HB31 216 aaPredicted RBP16.94■□□□□ 0.3
TRIM35-203ENST00000521253 HMG20AQ9NP66 347 aa16.94■□□□□ 0.3
TRIM35-203ENST00000521253 TMEM82A0PJX8 343 aa16.93■□□□□ 0.3
TRIM35-203ENST00000521253 PTGES3LE9PB15 166 aa16.93■□□□□ 0.3
TRIM35-203ENST00000521253 RNASEK-C17orf49H0YIS7 233 aa16.93■□□□□ 0.3
TRIM35-203ENST00000521253 CDK1P06493 297 aa16.93■□□□□ 0.3
TRIM35-203ENST00000521253 TMEM225BP0DP42 221 aa16.93■□□□□ 0.3
TRIM35-203ENST00000521253 MYF6P23409 242 aa16.93■□□□□ 0.3
TRIM35-203ENST00000521253 WNT4P56705 351 aa16.93■□□□□ 0.3
TRIM35-203ENST00000521253 RPS11P62280 158 aaKnown RBP eCLIP16.93■□□□□ 0.3
TRIM35-203ENST00000521253 KLRD1Q13241 179 aa16.93■□□□□ 0.3
TRIM35-203ENST00000521253 BLMHQ13867 455 aa16.93■□□□□ 0.3
TRIM35-203ENST00000521253 SLC9A3R2Q15599 337 aa16.93■□□□□ 0.3
TRIM35-203ENST00000521253 IZUMO2Q6UXV1 221 aa16.93■□□□□ 0.3
TRIM35-203ENST00000521253 SAXO1Q8IYX7 474 aa16.93■□□□□ 0.3
TRIM35-203ENST00000521253 PIP4P2Q8N4L2 257 aa16.93■□□□□ 0.3
TRIM35-203ENST00000521253 NANOGP1Q8N7R0 232 aa16.93■□□□□ 0.3
TRIM35-203ENST00000521253 ZSCAN4Q8NAM6 433 aaPredicted RBP16.93■□□□□ 0.3
TRIM35-203ENST00000521253 ZDHHC16Q969W1 377 aa16.93■□□□□ 0.3
TRIM35-203ENST00000521253 ANKRD60Q9BZ19 345 aa16.93■□□□□ 0.3
TRIM35-203ENST00000521253 UNKLQ9H9P5 680 aaKnown RBP16.93■□□□□ 0.3
TRIM35-203ENST00000521253 ERGIC3Q9Y282 383 aa16.93■□□□□ 0.3
TRIM35-203ENST00000521253 TENM1Q9UKZ4 2725 aa16.92■□□□□ 0.3
TRIM35-203ENST00000521253 TRBV5-5A0A0J9YX44 114 aa16.92■□□□□ 0.3
TRIM35-203ENST00000521253 PNMA8CA0A1B0GUJ8 204 aa16.92■□□□□ 0.3
TRIM35-203ENST00000521253 TAS2R43P59537 309 aa16.92■□□□□ 0.3
TRIM35-203ENST00000521253 ACTG1P63261 375 aa16.92■□□□□ 0.3
TRIM35-203ENST00000521253 YIF1BQ5BJH7 314 aa16.92■□□□□ 0.3
TRIM35-203ENST00000521253 SPIN3Q5JUX0 258 aa16.92■□□□□ 0.3
TRIM35-203ENST00000521253 C17orf107Q6ZR85 190 aa16.92■□□□□ 0.3
TRIM35-203ENST00000521253 OR8H2Q8N162 312 aa16.92■□□□□ 0.3
TRIM35-203ENST00000521253 OR52N4Q8NGI2 321 aa16.92■□□□□ 0.3
TRIM35-203ENST00000521253 SGCDQ92629 289 aa16.92■□□□□ 0.3
TRIM35-203ENST00000521253 ORAI1Q96D31 301 aa16.92■□□□□ 0.3
TRIM35-203ENST00000521253 SNX22Q96L94 193 aa16.92■□□□□ 0.3
TRIM35-203ENST00000521253 ZMAT3Q9HA38 289 aaKnown RBP16.92■□□□□ 0.3
TRIM35-203ENST00000521253 PAK1IP1Q9NWT1 392 aaPredicted RBP16.92■□□□□ 0.3
TRIM35-203ENST00000521253 SCN3BQ9NY72 215 aa16.92■□□□□ 0.3
TRIM35-203ENST00000521253 GSTK1Q9Y2Q3 226 aa16.92■□□□□ 0.3
TRIM35-203ENST00000521253 A0A0U1RQK1 487 aa16.91■□□□□ 0.3
TRIM35-203ENST00000521253 CLDN34H7C241 214 aa16.91■□□□□ 0.3
TRIM35-203ENST00000521253 MAGEB3O15480 346 aa16.91■□□□□ 0.3
TRIM35-203ENST00000521253 HOXA3O43365 443 aaPredicted RBP16.91■□□□□ 0.3
TRIM35-203ENST00000521253 CCL3L1P16619 93 aa16.91■□□□□ 0.3
TRIM35-203ENST00000521253 GUCA2AQ02747 115 aa16.91■□□□□ 0.3
TRIM35-203ENST00000521253 ZNF273Q14593 569 aa16.91■□□□□ 0.3
TRIM35-203ENST00000521253 RNLSQ5VYX0 342 aa16.91■□□□□ 0.3
TRIM35-203ENST00000521253 GDPD3Q7L5L3 318 aa16.91■□□□□ 0.3
TRIM35-203ENST00000521253 SATL1Q86VE3 508 aa16.91■□□□□ 0.3
TRIM35-203ENST00000521253 TBC1D15Q8TC07 691 aa16.91■□□□□ 0.3
TRIM35-203ENST00000521253 MYDGFQ969H8 173 aa16.91■□□□□ 0.3
TRIM35-203ENST00000521253 CPNE2Q96FN4 548 aaPredicted RBP16.91■□□□□ 0.3
TRIM35-203ENST00000521253 CHST6Q9GZX3 395 aa16.91■□□□□ 0.3
TRIM35-203ENST00000521253 RHOFQ9HBH0 211 aa16.91■□□□□ 0.3
TRIM35-203ENST00000521253 NOX4Q9NPH5 578 aa16.91■□□□□ 0.3
TRIM35-203ENST00000521253 GLS2Q9UI32 602 aa16.91■□□□□ 0.3
TRIM35-203ENST00000521253 A0A1W2PPH5 198 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 A0A1W2PRD5 423 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 A0A1W2PRF3 423 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 A0A1W2PRM7 423 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 GABRPO00591 440 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 PSPNO60542 156 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 ATP6V1G2O95670 118 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 RNASE1P07998 156 aaKnown RBP16.9■□□□□ 0.3
TRIM35-203ENST00000521253 CELP19835 753 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 GABRR1P24046 479 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 EDDM3BP56851 147 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 PPP3R1P63098 170 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 RIPK1Q13546 671 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 Q499Y3 187 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 NCR3LG1Q68D85 454 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 Q6YL49 198 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 C11orf42Q8N5U0 333 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 OR5D13Q8NGL4 314 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 TNFAIP8L1Q8WVP5 186 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 SLC25A28Q96A46 364 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 GPER1Q99527 375 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 NKX3-1Q99801 234 aaPredicted RBP16.9■□□□□ 0.3
TRIM35-203ENST00000521253 MND1Q9BWT6 205 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 CDCA4Q9BXL8 241 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 EXOSC4Q9NPD3 245 aaKnown RBP16.9■□□□□ 0.3
TRIM35-203ENST00000521253 TMEM138Q9NPI0 162 aa16.9■□□□□ 0.3
TRIM35-203ENST00000521253 SIRPB1O00241 398 aa16.89■□□□□ 0.29
TRIM35-203ENST00000521253 SH2D1BO14796 132 aa16.89■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms