RNA–Protein interactions for RNA: ENST00000518824.5

VEGFA-219, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 606 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-219ENST00000518824 PLCXD1Q9NUJ7 323 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 PAK1IP1Q9NWT1 392 aaPredicted RBP10.89□□□□□ -0.67
VEGFA-219ENST00000518824 PCDHGB5Q9Y5G0 923 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 TENM1Q9UKZ4 2725 aa10.89□□□□□ -0.67
VEGFA-219ENST00000518824 MAGEA13PA6NCF6 341 aa10.88□□□□□ -0.67
VEGFA-219ENST00000518824 SULT1B1O43704 296 aa10.88□□□□□ -0.67
VEGFA-219ENST00000518824 KDM4BO94953 1096 aa10.88□□□□□ -0.67
VEGFA-219ENST00000518824 HAND1O96004 215 aa10.88□□□□□ -0.67
VEGFA-219ENST00000518824 HCKP08631 526 aa10.88□□□□□ -0.67
VEGFA-219ENST00000518824 RPSAP08865 295 aaKnown RBP10.88□□□□□ -0.67
VEGFA-219ENST00000518824 MYL12AP19105 171 aa10.88□□□□□ -0.67
VEGFA-219ENST00000518824 DLX6P56179 175 aa10.88□□□□□ -0.67
VEGFA-219ENST00000518824 RPL31P62899 125 aaKnown RBP10.88□□□□□ -0.67
VEGFA-219ENST00000518824 KISS1Q15726 138 aa10.88□□□□□ -0.67
VEGFA-219ENST00000518824 CCDC58Q4VC31 144 aa10.88□□□□□ -0.67
VEGFA-219ENST00000518824 SERPINA12Q8IW75 414 aa10.88□□□□□ -0.67
VEGFA-219ENST00000518824 OR4S1Q8NGB4 309 aa10.88□□□□□ -0.67
VEGFA-219ENST00000518824 OR52N1Q8NH53 320 aa10.88□□□□□ -0.67
VEGFA-219ENST00000518824 GHSRQ92847 366 aa10.88□□□□□ -0.67
VEGFA-219ENST00000518824 ZDHHC16Q969W1 377 aa10.88□□□□□ -0.67
VEGFA-219ENST00000518824 SMIM19Q96E16 107 aa10.88□□□□□ -0.67
VEGFA-219ENST00000518824 HMG20AQ9NP66 347 aa10.88□□□□□ -0.67
VEGFA-219ENST00000518824 CNOT2Q9NZN8 540 aaKnown RBP10.88□□□□□ -0.67
VEGFA-219ENST00000518824 GSTK1Q9Y2Q3 226 aa10.88□□□□□ -0.67
VEGFA-219ENST00000518824 TRBV23-1A0A0A0MS06 115 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 A0A1W2PPK0 400 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 IRGMA1A4Y4 181 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 EFCAB10A6NFE3 127 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 M0R1W7 72 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 SIRPB1O00241 398 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 IGHV4-59P01825 116 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 RNASE1P07998 156 aaKnown RBP10.87□□□□□ -0.67
VEGFA-219ENST00000518824 CHRM2P08172 466 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 OCM2P0CE71 109 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 OCMP0CE72 109 aaPredicted RBP10.87□□□□□ -0.67
VEGFA-219ENST00000518824 EDDM3AQ14507 147 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 C6orf141Q5SZD1 244 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 METAP1DQ6UB28 335 aaPredicted RBP10.87□□□□□ -0.67
VEGFA-219ENST00000518824 CMTM4Q8IZR5 234 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 OR5D14Q8NGL3 314 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 OR10K1Q8NGX5 313 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 GPR148Q8TDV2 347 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 GCDHQ92947 438 aaPredicted RBP10.87□□□□□ -0.67
VEGFA-219ENST00000518824 TMEM106AQ96A25 262 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 AJUBAQ96IF1 538 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 DMRTB1Q96MA1 342 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 MYCBPQ99417 103 aaPredicted RBP10.87□□□□□ -0.67
VEGFA-219ENST00000518824 CHIAQ9BZP6 476 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 NEK6Q9HC98 313 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 ZNF581Q9P0T4 197 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 ZNF281Q9Y2X9 895 aa10.87□□□□□ -0.67
VEGFA-219ENST00000518824 ANK2Q01484 3957 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 TRAV8-7A0A075B6U6 113 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 TRBV5-5A0A0J9YX44 114 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 PTGES3LE9PB15 166 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 CLDN34H7C241 214 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 GABRPO00591 440 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 NPFFO15130 113 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 ALX3O95076 343 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 TMEM225BP0DP42 221 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 OMGP23515 440 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 SAA4P35542 130 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 OR3A1P47881 315 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 OR3A4PP47883 348 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 BMXP51813 675 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 EDDM3BP56851 147 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 BPIFB3P59826 476 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 INSL4Q14641 139 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 ZNF146Q15072 292 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 AWAT1Q58HT5 328 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 Q6P435 159 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 C12orf54Q6X4T0 127 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 ZNF782Q6ZMW2 699 aaPredicted RBP10.86□□□□□ -0.67
VEGFA-219ENST00000518824 C1orf122Q6ZSJ8 110 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 SATL1Q86VE3 508 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 OR8H2Q8N162 312 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 STX19Q8N4C7 294 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 NANOGP1Q8N7R0 232 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 SNX22Q96L94 193 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 OR5M11Q96RB7 305 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 FAM234AQ9H0X4 552 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 VCXQ9H320 206 aa10.86□□□□□ -0.67
VEGFA-219ENST00000518824 METTL8Q9H825 291 aaKnown RBP10.86□□□□□ -0.67
VEGFA-219ENST00000518824 UNKLQ9H9P5 680 aaKnown RBP10.86□□□□□ -0.67
VEGFA-219ENST00000518824 PIN1P1O15428 100 aa10.85□□□□□ -0.67
VEGFA-219ENST00000518824 CDRT1O95170 752 aa10.85□□□□□ -0.67
VEGFA-219ENST00000518824 OR2H2O95918 312 aa10.85□□□□□ -0.67
VEGFA-219ENST00000518824 CYB5AP00167 134 aa10.85□□□□□ -0.67
VEGFA-219ENST00000518824 CDK1P06493 297 aa10.85□□□□□ -0.67
VEGFA-219ENST00000518824 HKR1P10072 659 aa10.85□□□□□ -0.67
VEGFA-219ENST00000518824 IGFBP3P17936 291 aaPredicted RBP10.85□□□□□ -0.67
VEGFA-219ENST00000518824 RAB3AP20336 220 aa10.85□□□□□ -0.67
VEGFA-219ENST00000518824 GABRR1P24046 479 aa10.85□□□□□ -0.67
VEGFA-219ENST00000518824 COX7A1P24310 79 aa10.85□□□□□ -0.67
VEGFA-219ENST00000518824 COMPP49747 757 aaPredicted RBP10.85□□□□□ -0.67
VEGFA-219ENST00000518824 SCN1BQ07699 218 aa10.85□□□□□ -0.67
VEGFA-219ENST00000518824 GRK1Q15835 563 aa10.85□□□□□ -0.67
VEGFA-219ENST00000518824 C16orf87Q6PH81 154 aa10.85□□□□□ -0.67
VEGFA-219ENST00000518824 FIP1L1Q6UN15 594 aaKnown RBP10.85□□□□□ -0.67
VEGFA-219ENST00000518824 BAIAP2L2Q6UXY1 529 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms