RNA–Protein interactions for RNA: ENST00000515516.1

TCOF1-215, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-215ENST00000515516 SH2D1BO14796 132 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 FADS2O95864 444 aaKnown RBP11.1□□□□□ -0.63
TCOF1-215ENST00000515516 BCL3P20749 454 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 SNU13P55769 128 aaKnown RBP11.1□□□□□ -0.63
TCOF1-215ENST00000515516 NANOS3P60323 173 aaKnown RBP11.1□□□□□ -0.63
TCOF1-215ENST00000515516 PDZK1IP1Q13113 114 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 ALKBH1Q13686 389 aaKnown RBP11.1□□□□□ -0.63
TCOF1-215ENST00000515516 GALEQ14376 348 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 SPIN3Q5JUX0 258 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 ASPHD2Q6ICH7 369 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 C11orf88Q6PI97 169 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 ZBTB49Q6ZSB9 765 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 Q6ZTK2 550 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 LHFPL3Q86UP9 236 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 OR2T6Q8NHC8 308 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 LGALS12Q96DT0 336 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 MALSU1Q96EH3 234 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 OPALINQ96PE5 141 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 ALG8Q9BVK2 526 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 NPFFR1Q9GZQ6 430 aa11.1□□□□□ -0.63
TCOF1-215ENST00000515516 RBFOX1Q9NWB1 397 aaKnown RBP11.1□□□□□ -0.63
TCOF1-215ENST00000515516 IGKV1-9A0A0C4DH69 117 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 TMEM82A0PJX8 343 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 MEX3AA1L020 520 aaKnown RBP11.09□□□□□ -0.63
TCOF1-215ENST00000515516 FUOMA2VDF0 154 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 EBAG9O00559 213 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 MGST3O14880 152 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 IGHV1-8P0DP01 117 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 CALCBP10092 127 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 DBTP11182 482 aaKnown RBP11.09□□□□□ -0.63
TCOF1-215ENST00000515516 DUSP1P28562 367 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 KIR2DS4P43632 304 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 NPBWR2P48146 333 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 DLX6P56179 175 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 DEFA6Q01524 100 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 ZNF91Q05481 1191 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 MRPL28Q13084 256 aaKnown RBP11.09□□□□□ -0.63
TCOF1-215ENST00000515516 FAM189A2Q15884 450 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 C2orf68Q2NKX9 166 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 TRAPPC6BQ86SZ2 158 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 RPS4Y2Q8TD47 263 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 RNF166Q96A37 237 aaPredicted RBP11.09□□□□□ -0.63
TCOF1-215ENST00000515516 PELI1Q96FA3 418 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 AJUBAQ96IF1 538 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 NKX3-1Q99801 234 aaPredicted RBP11.09□□□□□ -0.63
TCOF1-215ENST00000515516 CHST6Q9GZX3 395 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 COMMD4Q9H0A8 199 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 ZCCHC4Q9H5U6 513 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 RANBP3Q9H6Z4 567 aaPredicted RBP11.09□□□□□ -0.63
TCOF1-215ENST00000515516 S100A14Q9HCY8 104 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 EXOSC4Q9NPD3 245 aaKnown RBP11.09□□□□□ -0.63
TCOF1-215ENST00000515516 INPP5EQ9NRR6 644 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 GSTK1Q9Y2Q3 226 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 LINC00312Q9Y6C7 94 aa11.09□□□□□ -0.63
TCOF1-215ENST00000515516 LOC100130705A0A1B0GUX0 176 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 FAM90A8PA6NJQ4 464 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 IGHA1P01876 353 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 MT-ND2P03891 347 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 HCKP08631 526 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 CCDC159P0C7I6 412 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 PAX6P26367 422 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 GBX2P52951 348 aaPredicted RBP11.08□□□□□ -0.64
TCOF1-215ENST00000515516 RAB40BQ12829 278 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 HERPUD1Q15011 391 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 ZNF146Q15072 292 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 KLHL22Q53GT1 634 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 PLA1AQ53H76 456 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 LHFPL4Q7Z7J7 247 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 SERPINA12Q8IW75 414 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 SYS1Q8N2H4 156 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 ZNF555Q8NEP9 628 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 OR11H6Q8NGC7 330 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 OR5D14Q8NGL3 314 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 OR13C9Q8NGT0 318 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 RHOXF1Q8NHV9 184 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 RFT1Q96AA3 541 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 CDCA4Q9BXL8 241 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 RHOFQ9HBH0 211 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 HMG20AQ9NP66 347 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 IL36RNQ9UBH0 155 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 AASSQ9UDR5 926 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 PITPNC1Q9UKF7 332 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 RPL36Q9Y3U8 105 aaKnown RBP11.08□□□□□ -0.64
TCOF1-215ENST00000515516 SESN1Q9Y6P5 492 aa11.08□□□□□ -0.64
TCOF1-215ENST00000515516 TMEM212A6NML5 194 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 OR4C45A6NMZ5 311 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 VGLL3A8MV65 326 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 E9PQ18 207 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 SIRPB1O00241 398 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 MAGEB3O15480 346 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 KCNAB3O43448 404 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 BAG2O95816 211 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 CSF1P09603 554 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 ERP29P30040 261 aaKnown RBP11.07□□□□□ -0.64
TCOF1-215ENST00000515516 P2RX3P56373 397 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 SCN1BQ07699 218 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 SSX2Q16385 188 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 MINOS1Q5TGZ0 78 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 ZNF626Q68DY1 528 aa11.07□□□□□ -0.64
TCOF1-215ENST00000515516 PQLC1Q8N2U9 271 aa11.07□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms