RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 ASPHD2Q6ICH7 369 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 LIAT1Q6ZQX7 453 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 GDPD3Q7L5L3 318 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 C10orf67Q8IYJ2 551 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 FAM58AQ8N1B3 248 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 OR52N4Q8NGI2 321 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 OR13C3Q8NGS6 347 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 OR13D1Q8NGV5 346 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 RHOXF1Q8NHV9 184 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 PPP1R35Q8TAP8 253 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 PIFOQ8TCI5 191 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 FOXRED1Q96CU9 486 aaPredicted RBP8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 MRPL48Q96GC5 212 aaKnown RBP8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 ZNF714Q96N38 554 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 OPALINQ96PE5 141 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 SLC29A1Q99808 456 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 ZNF649Q9BS31 505 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 ALG8Q9BVK2 526 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 S100A14Q9HCY8 104 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 RAB18Q9NP72 206 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 INPP5EQ9NRR6 644 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 FBLN5Q9UBX5 448 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 HHLA2Q9UM44 414 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 MYRFQ9Y2G1 1151 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 TBL2Q9Y4P3 447 aaKnown RBP8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 LINC00312Q9Y6C7 94 aa8.48□□□□□ -1.05
HMGXB3-205ENST00000514469 IGKV1-12A0A0C4DH73 117 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 hADV38S2A0JD32 116 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 MEX3AA1L020 520 aaKnown RBP8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 KCNAB3O43448 404 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 CHST1O43916 411 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 KDM4BO94953 1096 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 CYB5AP00167 134 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 IGKV1D-12P01611 117 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 PRKACAP17612 351 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 GABRR1P24046 479 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 PEX2P28328 305 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 GABRA5P31644 462 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 OR3A1P47881 315 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 LGALS4P56470 323 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 RAB40BQ12829 278 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 PDZK1IP1Q13113 114 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 EDDM3AQ14507 147 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 GRK1Q15835 563 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 LY6EQ16553 131 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 LDLRAD2Q5SZI1 272 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 SLC35E4Q6ICL7 350 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 LHFPL4Q7Z7J7 247 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 DYNAPQ8N1N2 210 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 PQLC1Q8N2U9 271 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 ZNF676Q8N7Q3 588 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 OR11H6Q8NGC7 330 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 OR13C9Q8NGT0 318 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 APH1BQ8WW43 257 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 Q96MT0 163 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 MYCBPQ99417 103 aaPredicted RBP8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 CHST6Q9GZX3 395 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 MMP27Q9H306 513 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 RANBP3Q9H6Z4 567 aaPredicted RBP8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 ISG20L2Q9H9L3 353 aaKnown RBP8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 TCF7L1Q9HCS4 588 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 HMG20AQ9NP66 347 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 ERVK13-1Q9NX77 482 aa8.47□□□□□ -1.05
HMGXB3-205ENST00000514469 LOC100130705A0A1B0GUX0 176 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 TMEM212A6NML5 194 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 MGST3O14880 152 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 ZFPL1O95159 310 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 FADS2O95864 444 aaKnown RBP8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 ARG1P05089 322 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 RPSAP08865 295 aaKnown RBP8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 DUSP1P28562 367 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 ERP29P30040 261 aaKnown RBP8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 EFNB2P52799 333 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 MRPL28Q13084 256 aaKnown RBP8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 ZBTB49Q6ZSB9 765 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 RNF144BQ7Z419 303 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 LHFPL3Q86UP9 236 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 SAXO1Q8IYX7 474 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 TPRX1Q8N7U7 411 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 OR4S1Q8NGB4 309 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 OR4C13Q8NGP0 309 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 RFT1Q96AA3 541 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 SPACA5Q96QH8 159 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 JAM3Q9BX67 310 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 COMMD4Q9H0A8 199 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 ZCCHC4Q9H5U6 513 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 RHOFQ9HBH0 211 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 EXOSC4Q9NPD3 245 aaKnown RBP8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 MRPS18AQ9NVS2 196 aaKnown RBP8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 FAM118AQ9NWS6 357 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 SESN1Q9Y6P5 492 aa8.46□□□□□ -1.06
HMGXB3-205ENST00000514469 IGHV2-26A0A0B4J1V2 119 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 E9PI62 339 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 SIRPB1O00241 398 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 EBAG9O00559 213 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 SULT1B1O43704 296 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 ALX3O95076 343 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 TSPAN15O95858 294 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 OR2H2O95918 312 aa8.45□□□□□ -1.06
HMGXB3-205ENST00000514469 CCDC159P0C7I6 412 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms