RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 SHISA3A0PJX4 238 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 NKX6-3A6NJ46 265 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 J3QLI3 93 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 K7N7A8 449 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 DVL1O14640 695 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 PLATP00750 562 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 TGFAP01135 160 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 TFAP2AP05549 437 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 CHRM2P08172 466 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 UBBP0CG47 229 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 PPIAL4GP0DN37 164 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 RANBP1P43487 201 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 ALDH3B2P48448 385 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 GNB2P62879 340 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 PAX5Q02548 391 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 TIMM50Q3ZCQ8 353 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 Q6P435 159 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 FIP1L1Q6UN15 594 aaKnown RBP12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 SATL1Q86VE3 508 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 GLCCI1Q86VQ1 547 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 TPRA1Q86W33 373 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 FAM216BQ8N7L0 139 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 CHST4Q8NCG5 386 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 OR4D6Q8NGJ1 314 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 EMG1Q92979 244 aaKnown RBP12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 SLC25A28Q96A46 364 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 MRPS26Q9BYN8 205 aaKnown RBP12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 METTL9Q9H1A3 318 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 HIF1ANQ9NWT6 349 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 FBLN5Q9UBX5 448 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 SSR3Q9UNL2 185 aa12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 FN1P02751 2386 aaKnown RBP12.88□□□□□ -0.35
POLR2J3-218ENST00000513506 SVEP1Q4LDE5 3571 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 A0A1B0GW55 424 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 SLC17A2O00624 439 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 NDUFB3O43676 98 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 LIPFP07098 398 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 DUX4L2P0CJ85 424 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 DUX4L3P0CJ86 424 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 DUX4L4P0CJ87 422 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 DUX4L5P0CJ88 424 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 DUX4L6P0CJ89 424 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 DUX4L7P0CJ90 424 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 QRFPP83859 136 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 PAX8Q06710 450 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 LRRC10Q5BKY1 277 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 DUX4L9Q6RFH8 374 aaPredicted RBP12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 LINC00596Q86U02 117 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 JAGN1Q8N5M9 183 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 OR6M1Q8NGM8 313 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 RAB40AQ8WXH6 277 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 SHARPINQ9H0F6 387 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 OR51E2Q9H255 320 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 IL36RNQ9UBH0 155 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 DUX4Q9UBX2 424 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 GSTK1Q9Y2Q3 226 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 MRPS28Q9Y2Q9 187 aaKnown RBP12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 INSIG2Q9Y5U4 225 aa12.87□□□□□ -0.35
POLR2J3-218ENST00000513506 LOC105371242A0A075B767 164 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 TRBV23-1A0A0A0MS06 115 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 IGHV2-70DA0A0C4DH43 119 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 FAM90A10PA6NDY2 464 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 FAM90A18PA6NE21 464 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 FAM90A16PA6NEW6 464 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 FAM90A20PA6NIJ5 464 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 FAM90A8PA6NJQ4 464 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 FAM90A7PA6NKC0 464 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 A8MV72 311 aaPredicted RBP12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 FAM90A22PA8MWA6 464 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 FAM90A12PA8MX19 464 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 FAM90A5PA8MXJ8 464 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 FAM90A23PA8MXZ1 464 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 C22orf46C9J442 243 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 PDCD5O14737 125 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 SH2D1BO14796 132 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 PHF1O43189 567 aaPredicted RBP12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 CDRT1O95170 752 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 HAND1O96004 215 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 FAM90A15PP0C7V4 464 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 FAM90A13PP0C7W8 464 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 FAM90A14PP0C7W9 464 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 FAM90A24PP0C7X0 464 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 ZNF16P17020 682 aaPredicted RBP12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 GADD45AP24522 165 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 GMFBP60983 142 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 LCN2P80188 198 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 RSU1Q15404 277 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 C22orf42Q6IC83 251 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 GLIPR1L1Q6UWM5 242 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 C17orf107Q6ZR85 190 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 LURAP1LQ8IV03 231 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 ZNRF1Q8ND25 227 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 SNX22Q96L94 193 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 MMP26Q9NRE1 261 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 GLS2Q9UI32 602 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 RPUSD1Q9UJJ7 312 aaKnown RBP12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 V9GY05 133 aa12.86□□□□□ -0.35
POLR2J3-218ENST00000513506 A0A0G2JMP0 313 aa12.85□□□□□ -0.35
POLR2J3-218ENST00000513506 A0A0X1KG70 313 aa12.85□□□□□ -0.35
POLR2J3-218ENST00000513506 TMEM82A0PJX8 343 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms