RNA–Protein interactions for RNA: ENST00000511426.5

SCLT1-209, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-209ENST00000511426 RASL12Q9NYN1 266 aa12.91□□□□□ -0.34
SCLT1-209ENST00000511426 C7orf66A4D0T2 115 aa12.9□□□□□ -0.34
SCLT1-209ENST00000511426 H0YL77 283 aa12.9□□□□□ -0.34
SCLT1-209ENST00000511426 CDIPTO14735 213 aa12.9□□□□□ -0.34
SCLT1-209ENST00000511426 MDH2P40926 338 aaKnown RBP12.9□□□□□ -0.34
SCLT1-209ENST00000511426 CCR6P51684 374 aa12.9□□□□□ -0.34
SCLT1-209ENST00000511426 MSMPQ1L6U9 139 aa12.9□□□□□ -0.34
SCLT1-209ENST00000511426 Q6ZS49 121 aa12.9□□□□□ -0.34
SCLT1-209ENST00000511426 TMEM17Q86X19 198 aa12.9□□□□□ -0.34
SCLT1-209ENST00000511426 BEST4Q8NFU0 473 aa12.9□□□□□ -0.34
SCLT1-209ENST00000511426 OR4K15Q8NH41 348 aa12.9□□□□□ -0.34
SCLT1-209ENST00000511426 ELMOD3Q96FG2 381 aa12.9□□□□□ -0.34
SCLT1-209ENST00000511426 MED30Q96HR3 178 aa12.9□□□□□ -0.34
SCLT1-209ENST00000511426 MRPL37Q9BZE1 423 aaKnown RBP12.9□□□□□ -0.34
SCLT1-209ENST00000511426 MSL2Q9HCI7 577 aa12.9□□□□□ -0.34
SCLT1-209ENST00000511426 TAAR3PQ9P1P4 343 aa12.9□□□□□ -0.34
SCLT1-209ENST00000511426 IL19Q9UHD0 177 aa12.9□□□□□ -0.34
SCLT1-209ENST00000511426 FZR1Q9UM11 496 aa12.9□□□□□ -0.34
SCLT1-209ENST00000511426 MCRIP1C9JLW8 97 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 F5H5P2 479 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 H7C1Q1 480 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 RHBDL1O75783 438 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 NXPH2O95156 264 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 AMY2AP04746 511 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 IFNA6P05013 189 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 GRPP07492 148 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 CD3EP07766 207 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 AMY2BP19961 511 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 ZNF81P51508 661 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 IKZF1Q13422 519 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 SFRP4Q6FHJ7 346 aaPredicted RBP12.89□□□□□ -0.35
SCLT1-209ENST00000511426 BPIFB2Q8N4F0 458 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 OR2Z1Q8NG97 314 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 SNAPC3Q92966 411 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 FAAP24Q9BTP7 215 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 FBXO9Q9UK97 447 aaPredicted RBP12.89□□□□□ -0.35
SCLT1-209ENST00000511426 MYO7BQ6PIF6 2116 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 TUBAL3A6NHL2 446 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 ZSCAN5BA6NJL1 495 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 A6NLC8 198 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 KNG1P01042 644 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 CD55P08174 381 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 ECI1P42126 302 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 SNU13P55769 128 aaKnown RBP12.89□□□□□ -0.35
SCLT1-209ENST00000511426 DAZAP2Q15038 168 aaPredicted RBP12.89□□□□□ -0.35
SCLT1-209ENST00000511426 NKPD1Q17RQ9 610 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 SMIM21Q3B7S5 101 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 VHLLQ6RSH7 139 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 WDR82Q6UXN9 313 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 C11orf53Q8IXP5 236 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 GVQW1Q8N7I0 195 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 OR5AP2Q8NGF4 316 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 OR51S1Q8NGJ8 323 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 OR5H2Q8NGV7 314 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 SYT3Q9BQG1 590 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 SULT4A1Q9BR01 284 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 ALX4Q9H161 411 aaPredicted RBP12.89□□□□□ -0.35
SCLT1-209ENST00000511426 FN3KRPQ9HA64 309 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 AK3Q9UIJ7 227 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 POU2F3Q9UKI9 436 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 ATP23Q9Y6H3 246 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 SPTA1P02549 2419 aa12.89□□□□□ -0.35
SCLT1-209ENST00000511426 MAP1BP46821 2468 aaKnown RBP12.88□□□□□ -0.35
SCLT1-209ENST00000511426 TRBV6-6A0A0A6YYG2 114 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 F8VVB4 439 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 F8VWA3 439 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 CLDN14O95500 239 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 IL5P05113 134 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 FCER2P06734 321 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 FCGR3AP08637 254 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 ZNF735P0CB33 412 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 HRH1P35367 487 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 KCNJ3P48549 501 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 TFF3Q07654 80 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 EFNB3Q15768 340 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 GRK1Q15835 563 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 ADIPOQQ15848 244 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 FAM209AQ5JX71 171 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 ATAD3CQ5T2N8 411 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 ZNF554Q86TJ5 538 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 LRP11Q86VZ4 500 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 ZDHHC22Q8N966 263 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 OR4D10Q8NGI6 311 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 PRR7Q8TB68 274 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 PLPPR2Q96GM1 343 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 MEGF10Q96KG7 1140 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 SCGB3A2Q96PL1 93 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 NEURL2Q9BR09 285 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 GINS4Q9BRT9 223 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 MYOZ1Q9NP98 299 aaPredicted RBP12.88□□□□□ -0.35
SCLT1-209ENST00000511426 MGAT4AQ9UM21 535 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 PRRC2CQ9Y520 2896 aaKnown RBP12.88□□□□□ -0.35
SCLT1-209ENST00000511426 CHD8Q9HCK8 2581 aa12.88□□□□□ -0.35
SCLT1-209ENST00000511426 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP12.87□□□□□ -0.35
SCLT1-209ENST00000511426 NKX2-6A6NCS4 301 aa12.87□□□□□ -0.35
SCLT1-209ENST00000511426 HMX3A6NHT5 357 aa12.87□□□□□ -0.35
SCLT1-209ENST00000511426 IFNL4K9M1U5 179 aa12.87□□□□□ -0.35
SCLT1-209ENST00000511426 SH2D1BO14796 132 aa12.87□□□□□ -0.35
SCLT1-209ENST00000511426 OR4A8P0C604 315 aa12.87□□□□□ -0.35
SCLT1-209ENST00000511426 OR3A3P47888 321 aa12.87□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms