RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 ERVK13-1Q9NX77 482 aa12.06□□□□□ -0.48
UBE2D3-228ENST00000508974 A0A1B0GUS0 222 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 hCG_1809904A0A1W2PP81 198 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 A0A1W2PPE2 198 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 A0A1W2PR64 198 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 A0A1W2PRV1 198 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 SIRPB1O00241 398 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 CLIC3O95833 236 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 PRKACBP22694 351 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 KRTAP10-3P60369 221 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 GRK1Q15835 563 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 MIDNQ504T8 468 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 LPCAT4Q643R3 524 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 UTS2BQ765I0 119 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 LHFPL4Q7Z7J7 247 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 OR8H2Q8N162 312 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 FAM58AQ8N1B3 248 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 BEND2Q8NDZ0 799 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 ZNF555Q8NEP9 628 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 OR52N4Q8NGI2 321 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 TSEN15Q8WW01 171 aaKnown RBP12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 PDCD1LG2Q9BQ51 273 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 ZNF696Q9H7X3 374 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 SMPD3Q9NY59 655 aaPredicted RBP12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 TRRAPQ9Y4A5 3859 aa12.05□□□□□ -0.48
UBE2D3-228ENST00000508974 MGAM2Q2M2H8 2515 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 IGKV1-12A0A0C4DH73 117 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 TRBV2A0A0J9YWF9 115 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 IGKV1D-12P01611 117 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 HCKP08631 526 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 GTF2A1P52655 376 aaPredicted RBP12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 DLX6P56179 175 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 LGALS4P56470 323 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 RPL15P61313 204 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 RAB40BQ12829 278 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 PDZK1IP1Q13113 114 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 ZSCAN26Q16670 478 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 Q8IYB0 196 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 SYS1Q8N2H4 156 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 OR4S1Q8NGB4 309 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 OR5R1Q8NH85 324 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 OR5AK2Q8NH90 309 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 CNIH3Q8TBE1 160 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 SPSB1Q96BD6 273 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 AJUBAQ96IF1 538 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 SNX22Q96L94 193 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 GSTK1Q9Y2Q3 226 aa12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 RPL36Q9Y3U8 105 aaKnown RBP12.04□□□□□ -0.48
UBE2D3-228ENST00000508974 C17orf98A8MV24 154 aa12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 PSPNO60542 156 aa12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 ZFPL1O95159 310 aa12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 ARG1P05089 322 aa12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 ZNF728P0DKX0 622 aa12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 PEX2P28328 305 aa12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 GBX2P52951 348 aaPredicted RBP12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 SCN1BQ07699 218 aa12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 DYNC1I2Q13409 638 aaKnown RBP12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 LRRC75BQ2VPJ9 315 aa12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 KLHL22Q53GT1 634 aa12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 TCF23Q7RTU1 214 aa12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 ZSCAN4Q8NAM6 433 aaPredicted RBP12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 CYGBQ8WWM9 190 aa12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 ZNF714Q96N38 554 aa12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 ZNF649Q9BS31 505 aa12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 COMMD4Q9H0A8 199 aa12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 ZCCHC4Q9H5U6 513 aa12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 ING3Q9NXR8 418 aa12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 DHDHQ9UQ10 334 aa12.03□□□□□ -0.48
UBE2D3-228ENST00000508974 MEGF8Q7Z7M0 2845 aa12.02□□□□□ -0.48
UBE2D3-228ENST00000508974 TMEM212A6NML5 194 aa12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 WBP4O75554 376 aaKnown RBP12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 LIMS3P0CW19 117 aa12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 LIMS4P0CW20 117 aa12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 TGFBR2P37173 567 aa12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 OR3A1P47881 315 aa12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 SOX2P48431 317 aa12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 XAF1Q6GPH4 301 aa12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 TREML4Q6UXN2 200 aa12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 TRAPPC6BQ86SZ2 158 aa12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 DYNAPQ8N1N2 210 aa12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 MYCBPQ99417 103 aaPredicted RBP12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 NKX3-1Q99801 234 aaPredicted RBP12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 HMG20AQ9NP66 347 aa12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 EXOSC4Q9NPD3 245 aaKnown RBP12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 INPP5EQ9NRR6 644 aa12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 GLS2Q9UI32 602 aa12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 SIGLEC9Q9Y336 463 aa12.02□□□□□ -0.49
UBE2D3-228ENST00000508974 hADV38S2A0JD32 116 aa12.01□□□□□ -0.49
UBE2D3-228ENST00000508974 SH2D1BO14796 132 aa12.01□□□□□ -0.49
UBE2D3-228ENST00000508974 SULT1B1O43704 296 aa12.01□□□□□ -0.49
UBE2D3-228ENST00000508974 OR2H2O95918 312 aa12.01□□□□□ -0.49
UBE2D3-228ENST00000508974 CCDC159P0C7I6 412 aa12.01□□□□□ -0.49
UBE2D3-228ENST00000508974 IGHV1-8P0DP01 117 aa12.01□□□□□ -0.49
UBE2D3-228ENST00000508974 TMEM225BP0DP42 221 aa12.01□□□□□ -0.49
UBE2D3-228ENST00000508974 ZNF44P15621 663 aa12.01□□□□□ -0.49
UBE2D3-228ENST00000508974 ETV1P50549 477 aa12.01□□□□□ -0.49
UBE2D3-228ENST00000508974 RAB13P51153 203 aa12.01□□□□□ -0.49
UBE2D3-228ENST00000508974 PROK1P58294 105 aa12.01□□□□□ -0.49
UBE2D3-228ENST00000508974 IL18R1Q13478 541 aa12.01□□□□□ -0.49
UBE2D3-228ENST00000508974 RCN1Q15293 331 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms