RNA–Protein interactions for RNA: ENST00000508871.5

NEDD4-209, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best)

Gene NEDD4, Length 5,707 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-209ENST00000508871 OR1L8Q8NGR8 309 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 SMIM19Q96E16 107 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 BOD1Q96IK1 185 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 PPP3R2Q96LZ3 170 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 TM2D2Q9BX73 214 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 TMEM9BQ9NQ34 198 aa3.4□□□□□ -1.87
NEDD4-209ENST00000508871 TCF20Q9UGU0 1960 aaKnown RBP3.4□□□□□ -1.87
NEDD4-209ENST00000508871 OR6C6A6NF89 314 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 VAMP5O95183 116 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 AKAIN1P0CW23 69 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 MPC1LP0DKB6 136 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 PLA2G5P39877 138 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 HCCSP53701 268 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 MAB21L1Q13394 359 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 DOC2BQ14184 412 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 TEAD2Q15562 447 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 FAM106AQ4KMX7 169 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 CD200R1LQ6Q8B3 271 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 SPRED2Q7Z698 418 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 C4orf33Q8N1A6 199 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 SVBPQ8N300 66 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 OR4E2Q8NGC2 313 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 OR4N2Q8NGD1 307 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 GATA6Q92908 595 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 ARL11Q969Q4 196 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 RERGLQ9H628 205 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 TNFRSF12AQ9NP84 129 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 NUDT4Q9NZJ9 180 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 OR2W5A6NFC9 320 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 C1orf196B1AJZ1 125 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 F6UZH7 168 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 G3V2L1 256 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 DEGS1O15121 323 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 KITLGP21583 273 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 FGF7P21781 194 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 RBMXP38159 391 aaKnown RBP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 ZFP36L2P47974 494 aaKnown RBP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 STC1P52823 247 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 ELF3P78545 371 aaPredicted RBP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 SRSF1Q07955 248 aaKnown RBP eCLIP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 ZNF763Q0D2J5 394 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 OR1C1Q15619 314 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 ISXQ2M1V0 245 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 LY6G6FQ5SQ64 297 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 OR8I2Q8N0Y5 310 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 RFLNBQ8N5W9 214 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 GPR26Q8NDV2 337 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 BADQ92934 168 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 KCNS1Q96KK3 526 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 NOL4LQ96MY1 436 aaPredicted RBP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 GPR21Q99679 349 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 OR52D1Q9H346 318 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 FNDC4Q9H6D8 234 aaPredicted RBP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 AURKAIP1Q9NWT8 199 aaPredicted RBP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 RIMS3Q9UJD0 308 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 SOX21Q9Y651 276 aaPredicted RBP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 ICOSLGO75144 302 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 IL3P08700 152 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 UBBP0CG47 229 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 ERGP11308 486 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 ZBTB25P24278 435 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 MFAP2P55001 183 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 INHBCP55103 352 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 CLDN20P56880 219 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 TAS2R43P59537 309 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 ERVFRD-1P60508 538 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 MS4A2Q01362 244 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 TCF23Q7RTU1 214 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 SLC34A3Q8N130 599 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 OR2K2Q8NGT1 345 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 VN1R17PQ8TDU5 208 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 RNF166Q96A37 237 aaPredicted RBP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 C4orf45Q96LM5 186 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 OR52E6Q96RD3 313 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 POTEKPQ9BYX7 375 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 ANXA10Q9UJ72 324 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 TRAPPC2LQ9UL33 140 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 ACOT9Q9Y305 439 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 OR2W1Q9Y3N9 320 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 SAA2-SAA4A0A096LPE2 208 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 IFNGP01579 166 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 GAPDHP04406 335 aaKnown RBP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 UCHL1P09936 223 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 VSIG8P0DPA2 414 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 HIST1H1EP10412 219 aaKnown RBP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 PVRP15151 417 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 COX5AP20674 150 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 ACVRL1P37023 503 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 MEOX2P50222 304 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 RAB13P51153 203 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 PPP1CBP62140 327 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 RPS14P62263 151 aaKnown RBP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 LSM3P62310 102 aaKnown RBP3.39□□□□□ -1.87
NEDD4-209ENST00000508871 BAXQ07812 192 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 EPGNQ6UW88 154 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 DNM1P46Q6ZS02 220 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 COX8CQ7Z4L0 72 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 C1orf210Q8IVY1 113 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 OR10G2Q8NGC3 310 aa3.39□□□□□ -1.87
NEDD4-209ENST00000508871 OR51G1Q8NGK1 321 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms