RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 FAM90A18PA6NE21 464 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 FAM90A16PA6NEW6 464 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 FAM90A20PA6NIJ5 464 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 FAM90A8PA6NJQ4 464 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 FAM90A7PA6NKC0 464 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 FAM90A22PA8MWA6 464 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 FAM90A12PA8MX19 464 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 FAM90A5PA8MXJ8 464 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 FAM90A23PA8MXZ1 464 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 B4DSR2 109 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 DEGS1O15121 323 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 ECDO95905 644 aaPredicted RBP16.76■□□□□ 0.27
USP53-203ENST00000507597 HAND1O96004 215 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 FAM90A15PP0C7V4 464 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 FAM90A13PP0C7W8 464 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 FAM90A14PP0C7W9 464 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 FAM90A24PP0C7X0 464 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 FOSL1P15407 271 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 ZNF44P15621 663 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 VBP1P61758 197 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 LMO4P61968 165 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 HES5Q5TA89 166 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 FAM166AQ6J272 317 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 SFXN4Q6P4A7 337 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 C18orf12Q96KH6 178 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 RNF167Q9H6Y7 350 aa16.76■□□□□ 0.27
USP53-203ENST00000507597 PRRC2AP48634 2157 aaKnown RBP16.75■□□□□ 0.27
USP53-203ENST00000507597 SHISA3A0PJX4 238 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 FUOMA2VDF0 154 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 F5H0A9 414 aaPredicted RBP16.75■□□□□ 0.27
USP53-203ENST00000507597 TNFRSF13BO14836 293 aaPredicted RBP16.75■□□□□ 0.27
USP53-203ENST00000507597 CALCBP10092 127 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 CD99P14209 185 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 MGMTP16455 207 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 SOX6P35712 828 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 OR10A3P58181 314 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 BLMHQ13867 455 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 C2orf76Q3KRA6 126 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 CYB5R2Q6BCY4 276 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 LINC01356Q8N9X3 169 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 OR51D1Q8NGF3 324 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 SEH1LQ96EE3 360 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 SNX22Q96L94 193 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 GFI1Q99684 422 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 NKX3-1Q99801 234 aaPredicted RBP16.75■□□□□ 0.27
USP53-203ENST00000507597 SSBP3Q9BWW4 388 aaPredicted RBP16.75■□□□□ 0.27
USP53-203ENST00000507597 TMEM59Q9BXS4 323 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 DAPK2Q9UIK4 370 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 RAB22AQ9UL26 194 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 CCDC168Q8NDH2 2452 aa16.75■□□□□ 0.27
USP53-203ENST00000507597 IGKV1D-17A0A075B6S4 117 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 SMIM31A0A1B0GVY4 71 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 F8VVB4 439 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 F8VWA3 439 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 SMAD7O15105 426 aaKnown RBP16.74■□□□□ 0.27
USP53-203ENST00000507597 MPIG6BO95866 241 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 RORCP51449 518 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 SNU13P55769 128 aaKnown RBP16.74■□□□□ 0.27
USP53-203ENST00000507597 RBM11P57052 281 aaKnown RBP16.74■□□□□ 0.27
USP53-203ENST00000507597 NCS1P62166 190 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 IKZF1Q13422 519 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 CTF1Q16619 201 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 TMEM249Q2WGJ8 235 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 SLC16A12Q6ZSM3 486 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 ASCC1Q8N9N2 400 aaKnown RBP16.74■□□□□ 0.27
USP53-203ENST00000507597 AP3S1Q92572 193 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 SLC25A28Q96A46 364 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 PTX4Q96A99 478 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 COX4I2Q96KJ9 171 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 SELENOIQ9C0D9 397 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 LIN7BQ9HAP6 207 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 ABRACLQ9P1F3 81 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 SLC25A10Q9UBX3 287 aaPredicted RBP16.74■□□□□ 0.27
USP53-203ENST00000507597 FBLN5Q9UBX5 448 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 OR5V1Q9UGF6 321 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 ZNF222Q9UK12 451 aa16.74■□□□□ 0.27
USP53-203ENST00000507597 A0A096LNT2 108 aa16.73■□□□□ 0.27
USP53-203ENST00000507597 METTL21EPA6NDL7 271 aa16.73■□□□□ 0.27
USP53-203ENST00000507597 OR7C1O76099 320 aaPredicted RBP16.73■□□□□ 0.27
USP53-203ENST00000507597 VSIG8P0DPA2 414 aa16.73■□□□□ 0.27
USP53-203ENST00000507597 GABRR1P24046 479 aa16.73■□□□□ 0.27
USP53-203ENST00000507597 KCNJ3P48549 501 aa16.73■□□□□ 0.27
USP53-203ENST00000507597 CAV3P56539 151 aa16.73■□□□□ 0.27
USP53-203ENST00000507597 COL10A1Q03692 680 aa16.73■□□□□ 0.27
USP53-203ENST00000507597 SCN1BQ07699 218 aa16.73■□□□□ 0.27
USP53-203ENST00000507597 HNRNPA0Q13151 305 aaKnown RBP16.73■□□□□ 0.27
USP53-203ENST00000507597 P2RY14Q15391 338 aa16.73■□□□□ 0.27
USP53-203ENST00000507597 IDNKQ5T6J7 187 aa16.73■□□□□ 0.27
USP53-203ENST00000507597 WDR25Q64LD2 544 aaPredicted RBP16.73■□□□□ 0.27
USP53-203ENST00000507597 LYPD2Q6UXB3 125 aa16.73■□□□□ 0.27
USP53-203ENST00000507597 TMEM185AQ8NFB2 350 aa16.73■□□□□ 0.27
USP53-203ENST00000507597 SLC25A46Q96AG3 418 aa16.73■□□□□ 0.27
USP53-203ENST00000507597 KCTD12Q96CX2 325 aaKnown RBP16.73■□□□□ 0.27
USP53-203ENST00000507597 C1orf159Q96HA4 380 aa16.73■□□□□ 0.27
USP53-203ENST00000507597 GAFA1Q96PS6 74 aa16.73■□□□□ 0.27
USP53-203ENST00000507597 NAA50Q9GZZ1 169 aaKnown RBP16.73■□□□□ 0.27
USP53-203ENST00000507597 DCSTAMPQ9H295 470 aa16.73■□□□□ 0.27
USP53-203ENST00000507597 IFT22Q9H7X7 185 aa16.73■□□□□ 0.27
USP53-203ENST00000507597 CSMD2Q7Z408 3487 aa16.72■□□□□ 0.27
USP53-203ENST00000507597 TMEM14DPA8MWL7 114 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms