RNA–Protein interactions for RNA: ENST00000507449.1

LSM6-205, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 3

Gene LSM6, Length 371 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-205ENST00000507449 NXT1Q9UKK6 140 aaKnown RBP1.66□□□□□ -2.14
LSM6-205ENST00000507449 SEC16AO15027 2179 aa1.65□□□□□ -2.14
LSM6-205ENST00000507449 GOLGA6L4A6NEF3 574 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 IGLL5B9A064 214 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 C4orf51C9J302 202 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 C9JQL5 133 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 K7EPK0 472 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 TCAPO15273 167 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 GYG2O15488 501 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 SPOPO43791 374 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 CCDC172P0C7W6 258 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 IMPA1P29218 277 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 ETV1P50549 477 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 STX4Q12846 297 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 SLC9A3R2Q15599 337 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 TMEM241Q24JQ0 296 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 MRPL2Q5T653 305 aaKnown RBP1.65□□□□□ -2.15
LSM6-205ENST00000507449 LIN9Q5TKA1 542 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 LINC00596Q86U02 117 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 CALHM3Q86XJ0 350 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 RBM45Q8IUH3 476 aaKnown RBP1.65□□□□□ -2.15
LSM6-205ENST00000507449 OR8S1Q8NH09 359 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 TMIGD2Q96BF3 282 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 OR2M4Q96R27 311 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 VAT1Q99536 393 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 SRRQ9GZT4 340 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 XKR8Q9H6D3 395 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 HAUS4Q9H6D7 363 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 WDR55Q9H6Y2 383 aaPredicted RBP1.65□□□□□ -2.15
LSM6-205ENST00000507449 AGPAT3Q9NRZ7 376 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 NLE1Q9NVX2 485 aaPredicted RBP1.65□□□□□ -2.15
LSM6-205ENST00000507449 TAC3Q9UHF0 121 aa1.65□□□□□ -2.15
LSM6-205ENST00000507449 SVILO95425 2214 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 ADAMTSL3P82987 1691 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 BAZ2AQ9UIF9 1905 aaKnown RBP1.64□□□□□ -2.15
LSM6-205ENST00000507449 BAZ1BQ9UIG0 1483 aaKnown RBP1.64□□□□□ -2.15
LSM6-205ENST00000507449 A0A1B0GW15 77 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 hCG_2039718K7EN88 272 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 SHOX2O60902 331 aaPredicted RBP1.64□□□□□ -2.15
LSM6-205ENST00000507449 ENTPD6O75354 484 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 KLHL2O95198 593 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 TRGV3P03979 118 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 IGKV5-2P06315 115 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 CDK1P06493 297 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 TGFBR2P37173 567 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 HTR2BP41595 481 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 RANBP1P43487 201 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 DNASE1L1P49184 302 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 GPR176Q14439 515 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 ACTBL2Q562R1 376 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 SPIN3Q5JUX0 258 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 UGT2A3Q6UWM9 527 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 BRD3OSQ6XYD6 125 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 Q6ZT83 130 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 GALNT10Q86SR1 603 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 MARCH3Q86UD3 253 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 ST13P4Q8IZP2 240 aaPredicted RBP1.64□□□□□ -2.15
LSM6-205ENST00000507449 ZNF664Q8N3J9 261 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 SPICQ8N5J4 248 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 CDRT4Q8N9R6 151 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 DRAXINQ8NBI3 349 aaPredicted RBP1.64□□□□□ -2.15
LSM6-205ENST00000507449 OR2AE1Q8NHA4 323 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 LRRC20Q8TCA0 184 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 BLNKQ8WV28 456 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 TVP23CQ96ET8 276 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 MSANTD3Q96H12 275 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 CIB1Q99828 191 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 COPS4Q9BT78 406 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 PLA2G12AQ9BZM1 189 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 ZNF436Q9C0F3 470 aaPredicted RBP1.64□□□□□ -2.15
LSM6-205ENST00000507449 SDHAF3Q9NRP4 125 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 INIPQ9NRY2 104 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 ZNF391Q9UJN7 358 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 POFUT2Q9Y2G5 429 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 LOXHD1Q8IVV2 1947 aa1.64□□□□□ -2.15
LSM6-205ENST00000507449 IGHV3-43A0A0B4J1X8 118 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 RAB19A4D1S5 217 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 H3BQ85 93 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 CDIPTO14735 213 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 SLC37A4O43826 429 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 COX7A2P2O60397 106 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 IGKV4-1P06312 121 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 CGB3P0DN86 165 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 CGB7P0DN87 165 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 CD34P28906 385 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 LGALS7P47929 136 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 GCLMP48507 274 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 XKP51811 444 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 KLF3P57682 345 aaPredicted RBP1.63□□□□□ -2.15
LSM6-205ENST00000507449 RAB38P57729 211 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 TNNC1P63316 161 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 ENDOGQ14249 297 aaKnown RBP1.63□□□□□ -2.15
LSM6-205ENST00000507449 ATP6AP1LQ52LC2 224 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 PDZD11Q5EBL8 140 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 ZNF660Q6AZW8 331 aaPredicted RBP1.63□□□□□ -2.15
LSM6-205ENST00000507449 ZFAND6Q6FIF0 208 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 GLYATQ6IB77 296 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 ZNF773Q6PK81 442 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 CYP4Z1Q86W10 505 aa1.63□□□□□ -2.15
LSM6-205ENST00000507449 ZFP82Q8N141 532 aa1.63□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms