RNA–Protein interactions for RNA: ENST00000506537.1

PDLIM7-216, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-216ENST00000506537 PCGF1Q9BSM1 259 aa15.03■□□□□ -0
PDLIM7-216ENST00000506537 Q9H521 79 aa15.03■□□□□ -0
PDLIM7-216ENST00000506537 CNTD2Q9H8S5 307 aa15.03■□□□□ -0
PDLIM7-216ENST00000506537 TMEM138Q9NPI0 162 aa15.03■□□□□ -0
PDLIM7-216ENST00000506537 C19orf12Q9NSK7 152 aa15.03■□□□□ -0
PDLIM7-216ENST00000506537 ZNF69Q9UC07 566 aa15.03■□□□□ -0
PDLIM7-216ENST00000506537 NUP50Q9UKX7 468 aa15.03■□□□□ -0
PDLIM7-216ENST00000506537 BLOC1S6Q9UL45 172 aa15.03■□□□□ -0
PDLIM7-216ENST00000506537 TMEM82A0PJX8 343 aa15.02■□□□□ -0
PDLIM7-216ENST00000506537 TOX4O94842 621 aa15.02■□□□□ -0
PDLIM7-216ENST00000506537 HAND1O96004 215 aa15.02■□□□□ -0
PDLIM7-216ENST00000506537 TK1P04183 234 aa15.02■□□□□ -0
PDLIM7-216ENST00000506537 EEF1B2P24534 225 aaKnown RBP15.02■□□□□ -0
PDLIM7-216ENST00000506537 OR3A4PP47883 348 aa15.02■□□□□ -0
PDLIM7-216ENST00000506537 TBCEQ15813 527 aaPredicted RBP15.02■□□□□ -0
PDLIM7-216ENST00000506537 TUSC1Q2TAM9 212 aa15.02■□□□□ -0
PDLIM7-216ENST00000506537 LIPKQ5VXJ0 399 aa15.02■□□□□ -0
PDLIM7-216ENST00000506537 ASCC1Q8N9N2 400 aaKnown RBP15.02■□□□□ -0
PDLIM7-216ENST00000506537 TNFAIP8L1Q8WVP5 186 aa15.02■□□□□ -0
PDLIM7-216ENST00000506537 GPER1Q99527 375 aa15.02■□□□□ -0
PDLIM7-216ENST00000506537 TMED9Q9BVK6 235 aa15.02■□□□□ -0
PDLIM7-216ENST00000506537 SEBOXQ9HB31 216 aaPredicted RBP15.02■□□□□ -0
PDLIM7-216ENST00000506537 NOX4Q9NPH5 578 aa15.02■□□□□ -0
PDLIM7-216ENST00000506537 ONECUT1Q9UBC0 465 aa15.02■□□□□ -0
PDLIM7-216ENST00000506537 TRBV23-1A0A0A0MS06 115 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 K7N7A8 449 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 MAGEB3O15480 346 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 SC5DO75845 299 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 RGS9O75916 674 aaPredicted RBP15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 CHRM2P08172 466 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 HSMCR30P0CW71 290 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 TGFBR2P37173 567 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 GP2P55259 537 aaKnown RBP15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 GABARAPL2P60520 117 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 SPIN3Q5JUX0 258 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 FAM27D1Q5T7N8 215 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 METTL11BQ5VVY1 283 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 UNQ9370/PRO34162Q6UXP9 181 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 C17orf107Q6ZR85 190 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 BCL6BQ8N143 479 aaPredicted RBP15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 KIR3DL3Q8N743 410 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 Q8N7P7 452 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 PXT1Q8NFP0 134 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 UFD1Q92890 307 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 CPNE2Q96FN4 548 aaPredicted RBP15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 DMRTB1Q96MA1 342 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 FAM234AQ9H0X4 552 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 OCEL1Q9H607 264 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 ISYNA1Q9NPH2 558 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 CKLFQ9UBR5 152 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 GSTK1Q9Y2Q3 226 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 SOX21Q9Y651 276 aaPredicted RBP15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 KPTNQ9Y664 436 aa15.01□□□□□ -0.01
PDLIM7-216ENST00000506537 ZNF93P35789 620 aaPredicted RBP15□□□□□ -0.01
PDLIM7-216ENST00000506537 DLX1P56177 255 aa15□□□□□ -0.01
PDLIM7-216ENST00000506537 MLLT11Q13015 90 aaPredicted RBP15□□□□□ -0.01
PDLIM7-216ENST00000506537 SCGB2A2Q13296 93 aa15□□□□□ -0.01
PDLIM7-216ENST00000506537 GPR50Q13585 617 aa15□□□□□ -0.01
PDLIM7-216ENST00000506537 TPBGQ13641 420 aa15□□□□□ -0.01
PDLIM7-216ENST00000506537 ACSM3Q53FZ2 586 aa15□□□□□ -0.01
PDLIM7-216ENST00000506537 FIP1L1Q6UN15 594 aaKnown RBP15□□□□□ -0.01
PDLIM7-216ENST00000506537 ASCL4Q6XD76 172 aa15□□□□□ -0.01
PDLIM7-216ENST00000506537 VMO1Q7Z5L0 202 aa15□□□□□ -0.01
PDLIM7-216ENST00000506537 FAM185AQ8N0U4 392 aa15□□□□□ -0.01
PDLIM7-216ENST00000506537 MS4A15Q8N5U1 240 aa15□□□□□ -0.01
PDLIM7-216ENST00000506537 OR10K1Q8NGX5 313 aa15□□□□□ -0.01
PDLIM7-216ENST00000506537 FAM192AQ9GZU8 254 aa15□□□□□ -0.01
PDLIM7-216ENST00000506537 RHOFQ9HBH0 211 aa15□□□□□ -0.01
PDLIM7-216ENST00000506537 FOXJ3Q9UPW0 622 aa15□□□□□ -0.01
PDLIM7-216ENST00000506537 A0A1W2PQ09 198 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 TCF21O43680 179 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 RRP9O43818 475 aaKnown RBP14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 PSPNO60542 156 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 CDRT1O95170 752 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 MAPK3P27361 379 aaPredicted RBP14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 PTGFRP43088 359 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 RPS25P62851 125 aaKnown RBP14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 PRB3Q04118 309 aaPredicted RBP14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 RUSC1-AS1Q66K80 236 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 ELP2Q6IA86 826 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 BRD3OSQ6XYD6 125 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 LYPD6Q86Y78 171 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 OR8H2Q8N162 312 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 OR4M1Q8NGD0 313 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 THRSPQ92748 146 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 SNX22Q96L94 193 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 ZNF48Q96MX3 618 aaPredicted RBP14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 MGLLQ99685 303 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 CHST6Q9GZX3 395 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 PPIL3Q9H2H8 161 aaKnown RBP14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 EXOSC4Q9NPD3 245 aaKnown RBP14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 ACOT13Q9NPJ3 140 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 SIRT7Q9NRC8 400 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 COL6A5A8TX70 2615 aa14.99□□□□□ -0.01
PDLIM7-216ENST00000506537 CENPVL3A0A0U1RRI6 287 aa14.98□□□□□ -0.01
PDLIM7-216ENST00000506537 SIRPB1O00241 398 aa14.98□□□□□ -0.01
PDLIM7-216ENST00000506537 VENTXO95231 258 aa14.98□□□□□ -0.01
PDLIM7-216ENST00000506537 OR2H2O95918 312 aa14.98□□□□□ -0.01
PDLIM7-216ENST00000506537 MAS1P04201 325 aa14.98□□□□□ -0.01
PDLIM7-216ENST00000506537 CPEP16870 476 aa14.98□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms