RNA–Protein interactions for RNA: ENST00000503215.5

SCLT1-204, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 1,364 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-204ENST00000503215 MMP27Q9H306 513 aa13.16□□□□□ -0.3
SCLT1-204ENST00000503215 FBLN5Q9UBX5 448 aa13.16□□□□□ -0.3
SCLT1-204ENST00000503215 DSCAML1Q8TD84 2053 aa13.15□□□□□ -0.3
SCLT1-204ENST00000503215 IGKV1-12A0A0C4DH73 117 aa13.15□□□□□ -0.3
SCLT1-204ENST00000503215 A0A1W2PPH5 198 aa13.15□□□□□ -0.3
SCLT1-204ENST00000503215 DAPL1A0PJW8 107 aa13.15□□□□□ -0.3
SCLT1-204ENST00000503215 SLC16A6O15403 523 aa13.15□□□□□ -0.3
SCLT1-204ENST00000503215 PSPNO60542 156 aa13.15□□□□□ -0.3
SCLT1-204ENST00000503215 HAND1O96004 215 aa13.15□□□□□ -0.3
SCLT1-204ENST00000503215 SERPINA3P01011 423 aa13.15□□□□□ -0.3
SCLT1-204ENST00000503215 IGKV1D-12P01611 117 aa13.15□□□□□ -0.3
SCLT1-204ENST00000503215 UBCP0CG48 685 aaKnown RBP13.15□□□□□ -0.3
SCLT1-204ENST00000503215 ATF1P18846 271 aa13.15□□□□□ -0.3
SCLT1-204ENST00000503215 LGALS4P56470 323 aa13.15□□□□□ -0.3
SCLT1-204ENST00000503215 PDLIM3Q53GG5 364 aaPredicted RBP13.15□□□□□ -0.3
SCLT1-204ENST00000503215 SLC25A30Q5SVS4 291 aa13.15□□□□□ -0.3
SCLT1-204ENST00000503215 FDX2Q6P4F2 183 aa13.15□□□□□ -0.3
SCLT1-204ENST00000503215 CCBE1Q6UXH8 406 aaPredicted RBP13.15□□□□□ -0.3
SCLT1-204ENST00000503215 OR8H2Q8N162 312 aa13.15□□□□□ -0.3
SCLT1-204ENST00000503215 C11orf44Q8N8P7 122 aa13.15□□□□□ -0.3
SCLT1-204ENST00000503215 OR4S1Q8NGB4 309 aa13.15□□□□□ -0.3
SCLT1-204ENST00000503215 FAM110DQ8TAY7 271 aaPredicted RBP13.15□□□□□ -0.3
SCLT1-204ENST00000503215 EMG1Q92979 244 aaKnown RBP13.15□□□□□ -0.3
SCLT1-204ENST00000503215 PELI1Q96FA3 418 aa13.15□□□□□ -0.3
SCLT1-204ENST00000503215 hCG_1809904A0A1W2PP81 198 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 A0A1W2PPE2 198 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 A0A1W2PR64 198 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 A0A1W2PRV1 198 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 OR4C45A6NMZ5 311 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 ODF3BA8MYP8 253 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 J3QLW9 94 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 MMP23AO75900 390 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 ARG1P05089 322 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 IGHV1-8P0DP01 117 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 ZNF19P17023 458 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 GABRB1P18505 474 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 AZGP1P25311 298 aaKnown RBP13.14□□□□□ -0.31
SCLT1-204ENST00000503215 KIR2DS4P43632 304 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 RBP2P50120 134 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 ALDH3A2P51648 485 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 EFNB2P52799 333 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 MTCP1P56278 107 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 ZNF91Q05481 1191 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 LSAMPQ13449 338 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 TMEM244Q5VVB8 128 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 GDPD3Q7L5L3 318 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 LHFPL3Q86UP9 236 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 CCDC54Q8NEL0 328 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 PP6455Q8WZ26 134 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 LGALS12Q96DT0 336 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 C4orf36Q96KX1 117 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 SNX22Q96L94 193 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 SLC29A1Q99808 456 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 AMBNQ9NP70 447 aa13.14□□□□□ -0.31
SCLT1-204ENST00000503215 EXOGQ9Y2C4 368 aaKnown RBP13.14□□□□□ -0.31
SCLT1-204ENST00000503215 TGP01266 2768 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 ISG15P05161 165 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 GABRR1P24046 479 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 ATP1B3P54709 279 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 PDZK1IP1Q13113 114 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 HABP2Q14520 560 aaPredicted RBP13.13□□□□□ -0.31
SCLT1-204ENST00000503215 CNN3Q15417 329 aaKnown RBP13.13□□□□□ -0.31
SCLT1-204ENST00000503215 GRK1Q15835 563 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 SSX2Q16385 188 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 AANATQ16613 207 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 BAIAP2L2Q6UXY1 529 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 UTS2BQ765I0 119 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 TMEM219Q86XT9 240 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 C1QL4Q86Z23 238 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 FAM58AQ8N1B3 248 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 ACBD7Q8N6N7 88 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 DNAAF1Q8NEP3 725 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 C10orf35Q96D05 121 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 ZNF649Q9BS31 505 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 ISG20L2Q9H9L3 353 aaKnown RBP13.13□□□□□ -0.31
SCLT1-204ENST00000503215 MYRFQ9Y2G1 1151 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 ORC6Q9Y5N6 252 aa13.13□□□□□ -0.31
SCLT1-204ENST00000503215 TRBV2A0A0J9YWF9 115 aa13.12□□□□□ -0.31
SCLT1-204ENST00000503215 E9PI62 339 aa13.12□□□□□ -0.31
SCLT1-204ENST00000503215 HTR1AP08908 422 aa13.12□□□□□ -0.31
SCLT1-204ENST00000503215 ZNF20P17024 532 aa13.12□□□□□ -0.31
SCLT1-204ENST00000503215 PRKACAP17612 351 aa13.12□□□□□ -0.31
SCLT1-204ENST00000503215 OR3A1P47881 315 aa13.12□□□□□ -0.31
SCLT1-204ENST00000503215 ACTC1P68032 377 aa13.12□□□□□ -0.31
SCLT1-204ENST00000503215 ACTA1P68133 377 aa13.12□□□□□ -0.31
SCLT1-204ENST00000503215 FAM189A2Q15884 450 aa13.12□□□□□ -0.31
SCLT1-204ENST00000503215 ZNF626Q68DY1 528 aa13.12□□□□□ -0.31
SCLT1-204ENST00000503215 KCTD20Q7Z5Y7 419 aa13.12□□□□□ -0.31
SCLT1-204ENST00000503215 OR11H6Q8NGC7 330 aa13.12□□□□□ -0.31
SCLT1-204ENST00000503215 OR5D18Q8NGL1 313 aa13.12□□□□□ -0.31
SCLT1-204ENST00000503215 OR4C13Q8NGP0 309 aa13.12□□□□□ -0.31
SCLT1-204ENST00000503215 ZNF714Q96N38 554 aa13.12□□□□□ -0.31
SCLT1-204ENST00000503215 NKX3-1Q99801 234 aaPredicted RBP13.12□□□□□ -0.31
SCLT1-204ENST00000503215 KIAA2026Q5HYC2 2103 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 SIRPB1O00241 398 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 PRKACBP22694 351 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 CCR9P51686 369 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 ACTA2P62736 377 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 ACTG2P63267 376 aa13.11□□□□□ -0.31
SCLT1-204ENST00000503215 MEF2CQ06413 473 aaPredicted RBP13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms