RNA–Protein interactions for RNA: ENST00000498613.1

TMEM39B-209, Transcript of transmembrane protein 39B, humanhuman

TSL 3

Gene TMEM39B, Length 854 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39B-209ENST00000498613 TMEM185AQ8NFB2 350 aa10.62□□□□□ -0.71
TMEM39B-209ENST00000498613 RAB40AQ8WXH6 277 aa10.62□□□□□ -0.71
TMEM39B-209ENST00000498613 ST8SIA4Q92187 359 aa10.62□□□□□ -0.71
TMEM39B-209ENST00000498613 SDSLQ96GA7 329 aa10.62□□□□□ -0.71
TMEM39B-209ENST00000498613 DMRTB1Q96MA1 342 aa10.62□□□□□ -0.71
TMEM39B-209ENST00000498613 MRI1Q9BV20 369 aa10.62□□□□□ -0.71
TMEM39B-209ENST00000498613 CNTD2Q9H8S5 307 aa10.62□□□□□ -0.71
TMEM39B-209ENST00000498613 RBFOX1Q9NWB1 397 aaKnown RBP10.62□□□□□ -0.71
TMEM39B-209ENST00000498613 HIF1ANQ9NWT6 349 aa10.62□□□□□ -0.71
TMEM39B-209ENST00000498613 IL36GQ9NZH8 169 aa10.62□□□□□ -0.71
TMEM39B-209ENST00000498613 V9GY05 133 aa10.62□□□□□ -0.71
TMEM39B-209ENST00000498613 LOC100506127A0A0U1RQW1 187 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 hCG_1809904A0A1W2PP81 198 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 A0A1W2PPE2 198 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 A0A1W2PR64 198 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 A0A1W2PRV1 198 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 A8MXK9 166 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 PHF1O43189 567 aaPredicted RBP10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 ENSAO43768 121 aaKnown RBP10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 CDRT1O95170 752 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 HAND1O96004 215 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 ZNF44P15621 663 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 RAB3BP20337 219 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 OR3A4PP47883 348 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 NPBWR2P48146 333 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 CAV3P56539 151 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 FGF12P61328 243 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 SCGB2A2Q13296 93 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 BLMHQ13867 455 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 ZNF146Q15072 292 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 SLC22A6Q4U2R8 563 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 FAM27D1Q5T7N8 215 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 C22orf42Q6IC83 251 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 ASPHD2Q6ICH7 369 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 GDPD3Q7L5L3 318 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 LINC00596Q86U02 117 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 CMTM4Q8IZR5 234 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 BATF2Q8N1L9 274 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 OSR2Q8N2R0 312 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 ASCC1Q8N9N2 400 aaKnown RBP10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 OR6M1Q8NGM8 313 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 KCNG3Q8TAE7 436 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 H1FXQ92522 213 aaKnown RBP10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 SEH1LQ96EE3 360 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 SNX22Q96L94 193 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 CHCHD6Q9BRQ6 235 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 TXNL4BQ9NX01 149 aaKnown RBP10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 LPAR3Q9UBY5 353 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 SCOCQ9UIL1 159 aa10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 POLR3KQ9Y2Y1 108 aaPredicted RBP10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 AK6Q9Y3D8 172 aaKnown RBP10.61□□□□□ -0.71
TMEM39B-209ENST00000498613 IGKV1D-17A0A075B6S4 117 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 TRIM64CA6NLI5 447 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 AIREO43918 545 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 BPNT1O95861 308 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 SFTPBP07988 381 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 ZNF16P17020 682 aaPredicted RBP10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 SERPINA2P20848 420 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 GABRR1P24046 479 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 RBMXP38159 391 aaKnown RBP10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 GP2P55259 537 aaKnown RBP10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 SNU13P55769 128 aaKnown RBP10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 COL10A1Q03692 680 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 HNRNPA0Q13151 305 aaKnown RBP10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 RAB11BQ15907 218 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 DGUOKQ16854 277 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 C1orf100Q5SVJ3 147 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 BTN2A1Q7KYR7 527 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 LRRTM1Q86UE6 522 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 FAM216BQ8N7L0 139 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 ZNRF1Q8ND25 227 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 SMR3AQ99954 134 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 NUDT16L1Q9BRJ7 211 aaKnown RBP10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 BEX2Q9BXY8 128 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 SHARPINQ9H0F6 387 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 C7orf69Q9H7B7 122 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 SPACA1Q9HBV2 294 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 TMEM160Q9NX00 188 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 ST3GAL6Q9Y274 331 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 ABCA1O95477 2261 aa10.6□□□□□ -0.71
TMEM39B-209ENST00000498613 DOCK11Q5JSL3 2073 aa10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 NSD1Q96L73 2696 aaPredicted RBP10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 TRBV23-1A0A0A0MS06 115 aa10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 IGKV1-12A0A0C4DH73 117 aa10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 KIR2DS1A0A191URI9 304 aa10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 A0A1W2PQ09 198 aa10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 F8VVB4 439 aa10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 F8VWA3 439 aa10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 K7N7A8 449 aa10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 CRTAPO75718 401 aaPredicted RBP10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 IGKV1D-12P01611 117 aa10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 TK1P04183 234 aa10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 CALCBP10092 127 aa10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 ARSBP15848 533 aa10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 ZFP36P26651 326 aaKnown RBP10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 DUSP1P28562 367 aa10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 RBM39Q14498 530 aaKnown RBP10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 IL13RA2Q14627 380 aa10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 ZNF841Q6ZN19 808 aa10.59□□□□□ -0.71
TMEM39B-209ENST00000498613 C1QL2Q7Z5L3 287 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms