RNA–Protein interactions for RNA: ENST00000496910.1

EXOSC3-208, Transcript of exosome component 3, humanhuman

TSL 2

Gene EXOSC3, Length 217 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-208ENST00000496910 ZNF501Q96CX3 271 aaPredicted RBP2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 RCN3Q96D15 328 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 SMIM19Q96E16 107 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 ZNF599Q96NL3 588 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 STACQ99469 402 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 GPR21Q99679 349 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 APOL4Q9BPW4 351 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 PDCD1LG2Q9BQ51 273 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 NUDT9Q9BW91 350 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 CLEC7AQ9BXN2 247 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 UGT2B28Q9BY64 529 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 SRXN1Q9BYN0 137 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 ARL6Q9H0F7 186 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 OR51B5Q9H339 312 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 DHX35Q9H5Z1 703 aaKnown RBP2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 METTL17Q9H7H0 456 aaPredicted RBP2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 MOB1AQ9H8S9 216 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 TMEM27Q9HBJ8 222 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 B3GAT2Q9NPZ5 323 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 DDIT4Q9NX09 232 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 CALYQ9NYX4 217 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 KCNIP1Q9NZI2 227 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 THAP10Q9P2Z0 257 aaPredicted RBP2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 OPN4Q9UHM6 478 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 SPATA2Q9UM82 520 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 AP3M1Q9Y2T2 418 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 UBIAD1Q9Y5Z9 338 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 HECTD4Q9Y4D8 3996 aa2.85□□□□□ -1.95
EXOSC3-208ENST00000496910 PCDH15Q96QU1 1955 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 ISPDA4D126 451 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 A6NDN8 102 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 GJE1A6NN92 205 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 H3BNH8 94 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 H7C1H1 209 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 ZNF593O00488 134 aaPredicted RBP2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 SYNGR1O43759 233 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 IDH3BO43837 385 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 FGF17O60258 216 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 SEMA4FO95754 770 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 AIFM1O95831 613 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 OR5AL1P0C617 328 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 CFC1BP0CG36 223 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 CFC1P0CG37 223 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 CCDC166P0CW27 439 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 CT45A10P0DMU9 189 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 SLC2A1P11166 492 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 FUT3P21217 361 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 DTYMKP23919 212 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 MSNP26038 577 aaKnown RBP2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 HRH1P35367 487 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 GCKP35557 465 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 KLK7P49862 253 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 PSMD7P51665 324 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 NDUFV3P56181 108 aaKnown RBP2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 RAB8AP61006 207 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 PPP1CBP62140 327 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 TWF1Q12792 350 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 CLINT1Q14677 625 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 ARL6IP1Q15041 203 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 SIX1Q15475 284 aaPredicted RBP2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 TRIP13Q15645 432 aaPredicted RBP2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 C4orf26Q17RF5 130 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 CCNJQ5T5M9 372 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 UBE2UQ5VVX9 321 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 HBMQ6B0K9 141 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 CNIH2Q6PI25 160 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 CD200R1LQ6Q8B3 271 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 NPSR1Q6W5P4 371 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 GDPD3Q7L5L3 318 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 TAC4Q86UU9 113 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 P2RY8Q86VZ1 359 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 RAB43Q86YS6 212 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 APLFQ8IW19 511 aaPredicted RBP2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 PRSS58Q8IYP2 241 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 PNKDQ8N490 385 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 SPICQ8N5J4 248 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 CCDC54Q8NEL0 328 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 OR8G5Q8NG78 346 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 OR52E2Q8NGJ4 325 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 OR51G1Q8NGK1 321 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 OR2A12Q8NGT7 310 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 NELFBQ8WX92 580 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 AP3S1Q92572 193 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 TLCD1Q96CP7 247 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 DNAJC19Q96DA6 116 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 PIK3IP1Q96FE7 263 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 ATXN7L3BQ96GX2 97 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 KCTD7Q96MP8 289 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 WFIKKN1Q96NZ8 548 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 PRRT1Q99946 306 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 MRPS26Q9BYN8 205 aaKnown RBP2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 C20orf85Q9H1P6 137 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 UVRAGQ9P2Y5 699 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 CRCT1Q9UGL9 99 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 ASF1AQ9Y294 204 aa2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 DYNC2H1Q8NCM8 4307 aaKnown RBP2.84□□□□□ -1.95
EXOSC3-208ENST00000496910 SACSQ9NZJ4 4579 aa2.84□□□□□ -1.96
EXOSC3-208ENST00000496910 A0A087WW49 117 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 IGHV2OR16-5A0A0B4J2B6 119 aa2.83□□□□□ -1.96
EXOSC3-208ENST00000496910 A6NIZ1 184 aa2.83□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms