RNA–Protein interactions for RNA: ENST00000496043.5

PTPRF-214, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 415 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-214ENST00000496043 LIAT1Q6ZQX7 453 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 LHFPL3Q86UP9 236 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 ZNF676Q8N7Q3 588 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 OR52N4Q8NGI2 321 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 RHOXF1Q8NHV9 184 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 SPSB1Q96BD6 273 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 LGALS12Q96DT0 336 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 PELI1Q96FA3 418 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 C4orf36Q96KX1 117 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 ZNF714Q96N38 554 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 MMP27Q9H306 513 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 AASSQ9UDR5 926 aa10.34□□□□□ -0.75
PTPRF-214ENST00000496043 TBL2Q9Y4P3 447 aaKnown RBP10.34□□□□□ -0.75
PTPRF-214ENST00000496043 TRRAPQ9Y4A5 3859 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 TRBV2A0A0J9YWF9 115 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 OR4C45A6NMZ5 311 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 KCNAB3O43448 404 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 FADS2O95864 444 aaKnown RBP10.33□□□□□ -0.76
PTPRF-214ENST00000496043 IGHA1P01876 353 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 MT-ND2P03891 347 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 IGHV1-8P0DP01 117 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 PRKACAP17612 351 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 BCL3P20749 454 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 PAX6P26367 422 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 DUSP1P28562 367 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 DEFA6Q01524 100 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 ZNF91Q05481 1191 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 DYNC1I2Q13409 638 aaKnown RBP10.33□□□□□ -0.76
PTPRF-214ENST00000496043 EDDM3AQ14507 147 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 SPIN3Q5JUX0 258 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 C11orf88Q6PI97 169 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 CRIP3Q6Q6R5 217 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 ZBTB49Q6ZSB9 765 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 LHFPL4Q7Z7J7 247 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 SYS1Q8N2H4 156 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 OR11H6Q8NGC7 330 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 OR4C13Q8NGP0 309 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 OR13C3Q8NGS6 347 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 PIFOQ8TCI5 191 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 OPALINQ96PE5 141 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 SLC29A1Q99808 456 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 CDCA4Q9BXL8 241 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 ZCCHC4Q9H5U6 513 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 RHOFQ9HBH0 211 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 S100A14Q9HCY8 104 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 HMG20AQ9NP66 347 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 RBFOX1Q9NWB1 397 aaKnown RBP10.33□□□□□ -0.76
PTPRF-214ENST00000496043 LINC00312Q9Y6C7 94 aa10.33□□□□□ -0.76
PTPRF-214ENST00000496043 LOC100130705A0A1B0GUX0 176 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 MEX3AA1L020 520 aaKnown RBP10.32□□□□□ -0.76
PTPRF-214ENST00000496043 FUOMA2VDF0 154 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 VGLL3A8MV65 326 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 MGST3O14880 152 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 CALCBP10092 127 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 DBTP11182 482 aaKnown RBP10.32□□□□□ -0.76
PTPRF-214ENST00000496043 GABRB1P18505 474 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 ERP29P30040 261 aaKnown RBP10.32□□□□□ -0.76
PTPRF-214ENST00000496043 GBX2P52951 348 aaPredicted RBP10.32□□□□□ -0.76
PTPRF-214ENST00000496043 MRPL28Q13084 256 aaKnown RBP10.32□□□□□ -0.76
PTPRF-214ENST00000496043 FAM189A2Q15884 450 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 SSX2Q16385 188 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 KLHL22Q53GT1 634 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 ZNF626Q68DY1 528 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 Q6ZTK2 550 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 OR4S1Q8NGB4 309 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 OR51A4Q8NGJ6 313 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 OR5D14Q8NGL3 314 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 OR10AC1Q8NH08 325 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 OR2T6Q8NHC8 308 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 FOXRED1Q96CU9 486 aaPredicted RBP10.32□□□□□ -0.76
PTPRF-214ENST00000496043 ALG8Q9BVK2 526 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 NPFFR1Q9GZQ6 430 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 CHST6Q9GZX3 395 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 RANBP3Q9H6Z4 567 aaPredicted RBP10.32□□□□□ -0.76
PTPRF-214ENST00000496043 AMBNQ9NP70 447 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 ABCB10Q9NRK6 738 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 INPP5EQ9NRR6 644 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 FAM118AQ9NWS6 357 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 IL36RNQ9UBH0 155 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 MYRFQ9Y2G1 1151 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 GSTK1Q9Y2Q3 226 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 SIGLEC9Q9Y336 463 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 RPL36Q9Y3U8 105 aaKnown RBP10.32□□□□□ -0.76
PTPRF-214ENST00000496043 PCDHGB5Q9Y5G0 923 aa10.32□□□□□ -0.76
PTPRF-214ENST00000496043 ODF3BA8MYP8 253 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 H3BUI4 141 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 EBAG9O00559 213 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 PSPNO60542 156 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 KDM4BO94953 1096 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 ALX3O95076 343 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 RAB13P51153 203 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 EFNB2P52799 333 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 SNU13P55769 128 aaKnown RBP10.31□□□□□ -0.76
PTPRF-214ENST00000496043 RAB40BQ12829 278 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 HERPUD1Q15011 391 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 SERPINA12Q8IW75 414 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 SAXO1Q8IYX7 474 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 DYNAPQ8N1N2 210 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 TPRX1Q8N7U7 411 aa10.31□□□□□ -0.76
PTPRF-214ENST00000496043 OR13C9Q8NGT0 318 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms