RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 GTF2F2P13984 249 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 AMY2BP19961 511 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 GATA3P23771 443 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 GADD45AP24522 165 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 CAPZA1P52907 286 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 SEC61A1P61619 476 aaKnown RBP14.23□□□□□ -0.13
HDAC6-235ENST00000495515 C1orf100Q5SVJ3 147 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 ZNF841Q6ZN19 808 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 LYPD6Q86Y78 171 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 TMEM185AQ8NFB2 350 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 Q8NFD4 153 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 OR6M1Q8NGM8 313 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 PPP1R35Q8TAP8 253 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 ST8SIA4Q92187 359 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 MRPS24Q96EL2 167 aaKnown RBP14.23□□□□□ -0.13
HDAC6-235ENST00000495515 NKX3-1Q99801 234 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-235ENST00000495515 FAM234AQ9H0X4 552 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 YAE1D1Q9NRH1 226 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 HIF1ANQ9NWT6 349 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 SLC25A10Q9UBX3 287 aaPredicted RBP14.23□□□□□ -0.13
HDAC6-235ENST00000495515 AK6Q9Y3D8 172 aaKnown RBP14.23□□□□□ -0.13
HDAC6-235ENST00000495515 V9GY05 133 aa14.23□□□□□ -0.13
HDAC6-235ENST00000495515 LOC105371242A0A075B767 164 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 A0A0G2JMP0 313 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 A0A0X1KG70 313 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 A8MV72 311 aaPredicted RBP14.22□□□□□ -0.13
HDAC6-235ENST00000495515 AIREO43918 545 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 SERPINA2P20848 420 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 ZFP36P26651 326 aaKnown RBP14.22□□□□□ -0.13
HDAC6-235ENST00000495515 HTR2CP28335 458 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 SNU13P55769 128 aaKnown RBP14.22□□□□□ -0.13
HDAC6-235ENST00000495515 KRTAP1-1Q07627 177 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 DGUOKQ16854 277 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 SLC22A6Q4U2R8 563 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 BTNL3Q6UXE8 466 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 TPRA1Q86W33 373 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 OSR2Q8N2R0 312 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 CD177Q8N6Q3 437 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 OR4M2Q8NGB6 313 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 OR4D6Q8NGJ1 314 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 OR10K1Q8NGX5 313 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 YIPF6Q96EC8 236 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 CST11Q9H112 138 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 MAB21L2Q9Y586 359 aa14.22□□□□□ -0.13
HDAC6-235ENST00000495515 CR1P17927 2039 aa14.21□□□□□ -0.13
HDAC6-235ENST00000495515 KIAA1324LA8MWY0 1029 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-235ENST00000495515 SLC17A2O00624 439 aa14.21□□□□□ -0.13
HDAC6-235ENST00000495515 CALCBP10092 127 aa14.21□□□□□ -0.13
HDAC6-235ENST00000495515 CD37P11049 281 aa14.21□□□□□ -0.13
HDAC6-235ENST00000495515 NDUFB7P17568 137 aa14.21□□□□□ -0.13
HDAC6-235ENST00000495515 RAB3BP20337 219 aa14.21□□□□□ -0.13
HDAC6-235ENST00000495515 CEBPDP49716 269 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-235ENST00000495515 CAV3P56539 151 aa14.21□□□□□ -0.13
HDAC6-235ENST00000495515 COL10A1Q03692 680 aa14.21□□□□□ -0.13
HDAC6-235ENST00000495515 IL13RA2Q14627 380 aa14.21□□□□□ -0.13
HDAC6-235ENST00000495515 DCAF12L2Q5VW00 463 aa14.21□□□□□ -0.13
HDAC6-235ENST00000495515 ASCC1Q8N9N2 400 aaKnown RBP14.21□□□□□ -0.13
HDAC6-235ENST00000495515 CHST4Q8NCG5 386 aa14.21□□□□□ -0.13
HDAC6-235ENST00000495515 ZNRF1Q8ND25 227 aa14.21□□□□□ -0.13
HDAC6-235ENST00000495515 OR51T1Q8NGJ9 327 aa14.21□□□□□ -0.13
HDAC6-235ENST00000495515 OR13F1Q8NGS4 319 aa14.21□□□□□ -0.13
HDAC6-235ENST00000495515 GSX1Q9H4S2 264 aaPredicted RBP14.21□□□□□ -0.13
HDAC6-235ENST00000495515 VPS13CQ709C8 3753 aa14.21□□□□□ -0.14
HDAC6-235ENST00000495515 A0A1B0GW55 424 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 DEGS1O15121 323 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 SLC22A1O15245 554 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 ENSAO43768 121 aaKnown RBP14.2□□□□□ -0.14
HDAC6-235ENST00000495515 TFF1P04155 84 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 LIPFP07098 398 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 DUX4L2P0CJ85 424 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 DUX4L3P0CJ86 424 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 DUX4L4P0CJ87 422 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 DUX4L5P0CJ88 424 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 DUX4L6P0CJ89 424 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 DUX4L7P0CJ90 424 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 ZNF44P15621 663 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 DUSP1P28562 367 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 RAB11BQ15907 218 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 NHLRC3Q5JS37 347 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 DUX4L9Q6RFH8 374 aaPredicted RBP14.2□□□□□ -0.14
HDAC6-235ENST00000495515 GPR141Q7Z602 305 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 LINC00596Q86U02 117 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 OR5D13Q8NGL4 314 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 RAB40AQ8WXH6 277 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 SNX22Q96L94 193 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 IL36RNQ9UBH0 155 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 DUX4Q9UBX2 424 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 SCOCQ9UIL1 159 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 ST3GAL6Q9Y274 331 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 CSPG4Q6UVK1 2322 aa14.2□□□□□ -0.14
HDAC6-235ENST00000495515 H3BUI4 141 aa14.19□□□□□ -0.14
HDAC6-235ENST00000495515 J3QLI3 93 aa14.19□□□□□ -0.14
HDAC6-235ENST00000495515 K7N7A8 449 aa14.19□□□□□ -0.14
HDAC6-235ENST00000495515 CRTAPO75718 401 aaPredicted RBP14.19□□□□□ -0.14
HDAC6-235ENST00000495515 BPNT1O95861 308 aa14.19□□□□□ -0.14
HDAC6-235ENST00000495515 TK1P04183 234 aa14.19□□□□□ -0.14
HDAC6-235ENST00000495515 SELLP14151 372 aa14.19□□□□□ -0.14
HDAC6-235ENST00000495515 GABRR1P24046 479 aa14.19□□□□□ -0.14
HDAC6-235ENST00000495515 SCN1BQ07699 218 aa14.19□□□□□ -0.14
HDAC6-235ENST00000495515 BTN2A1Q7KYR7 527 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms