RNA–Protein interactions for RNA: ENST00000495232.5

CSNK1E-213, Transcript of casein kinase 1 epsilon, humanhuman

TSL 2

Gene CSNK1E, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1E-213ENST00000495232 MTNR1BP49286 362 aa10.03□□□□□ -0.8
CSNK1E-213ENST00000495232 CEBPDP49716 269 aaPredicted RBP10.03□□□□□ -0.8
CSNK1E-213ENST00000495232 CAV3P56539 151 aa10.03□□□□□ -0.8
CSNK1E-213ENST00000495232 COL10A1Q03692 680 aa10.03□□□□□ -0.8
CSNK1E-213ENST00000495232 SCGB2A2Q13296 93 aa10.03□□□□□ -0.8
CSNK1E-213ENST00000495232 DGUOKQ16854 277 aa10.03□□□□□ -0.8
CSNK1E-213ENST00000495232 SPIN3Q5JUX0 258 aa10.03□□□□□ -0.8
CSNK1E-213ENST00000495232 DUX4L9Q6RFH8 374 aaPredicted RBP10.03□□□□□ -0.8
CSNK1E-213ENST00000495232 IL17RELQ6ZVW7 336 aa10.03□□□□□ -0.8
CSNK1E-213ENST00000495232 RNF144BQ7Z419 303 aa10.03□□□□□ -0.8
CSNK1E-213ENST00000495232 CD177Q8N6Q3 437 aa10.03□□□□□ -0.8
CSNK1E-213ENST00000495232 ASCC1Q8N9N2 400 aaKnown RBP10.03□□□□□ -0.8
CSNK1E-213ENST00000495232 METTL9Q9H1A3 318 aa10.03□□□□□ -0.8
CSNK1E-213ENST00000495232 HMG20AQ9NP66 347 aa10.03□□□□□ -0.8
CSNK1E-213ENST00000495232 DUX4Q9UBX2 424 aa10.03□□□□□ -0.8
CSNK1E-213ENST00000495232 ZNF222Q9UK12 451 aa10.03□□□□□ -0.8
CSNK1E-213ENST00000495232 AUP1Q9Y679 476 aa10.03□□□□□ -0.8
CSNK1E-213ENST00000495232 ARHGAP32A7KAX9 2087 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 A0A087WXM4 84 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 IGKV1-12A0A0C4DH73 117 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 A0A1W2PQ09 198 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 PIN1P1O15428 100 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 ZNF780AO75290 641 aaPredicted RBP10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 SC5DO75845 299 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 CDRT1O95170 752 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 HTR3BO95264 441 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 IGKV1D-12P01611 117 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 SFTPBP07988 381 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 UCHL1P09936 223 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 SELLP14151 372 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 GABRR1P24046 479 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 DUSP1P28562 367 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 FABP5Q01469 135 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 SCN1BQ07699 218 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 GPR176Q14439 515 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 ZNF146Q15072 292 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 NEDD8Q15843 81 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 FAM27D1Q5T7N8 215 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 GLT8D1Q68CQ7 371 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 AWAT2Q6E213 333 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 TSPAN14Q8NG11 270 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 OR5D13Q8NGL4 314 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 PPP1R35Q8TAP8 253 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 NANPQ8TBE9 248 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 FOXRED1Q96CU9 486 aaPredicted RBP10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 NR1H4Q96RI1 486 aaPredicted RBP10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 NKX3-1Q99801 234 aaPredicted RBP10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 UQCC2Q9BRT2 126 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 TMPRSS13Q9BYE2 586 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 FAM234AQ9H0X4 552 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 EXOSC4Q9NPD3 245 aaKnown RBP10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 NDUFB11Q9NX14 153 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 RPUSD1Q9UJJ7 312 aaKnown RBP10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 SF3B6Q9Y3B4 125 aaKnown RBP10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 MAB21L2Q9Y586 359 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 ZFHX3Q15911 3703 aa10.02□□□□□ -0.81
CSNK1E-213ENST00000495232 A0A1W2PPH5 198 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 MAGEA13PA6NCF6 341 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 C22orf46C9J442 243 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 TK1P04183 234 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 PPIAL4GP0DN37 164 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 ZNF44P15621 663 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 SERPINA2P20848 420 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 CALRP27797 417 aaKnown RBP10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 FGF12P61328 243 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 PAX2Q02962 417 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 PAX8Q06710 450 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 SSX1Q16384 188 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 METTL11BQ5VVY1 283 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 ELP2Q6IA86 826 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 CRIP3Q6Q6R5 217 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 TMEM91Q6ZNR0 172 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 GDPD3Q7L5L3 318 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 C1QL2Q7Z5L3 287 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 CMTM4Q8IZR5 234 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 FGFRL1Q8N441 504 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 OR10K1Q8NGX5 313 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 TBC1D15Q8TC07 691 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 MUL1Q969V5 352 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 DCTN5Q9BTE1 182 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 CNTD2Q9H8S5 307 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 SEBOXQ9HB31 216 aaPredicted RBP10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 ONECUT1Q9UBC0 465 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 IL36RNQ9UBH0 155 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 METRNQ9UJH8 293 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 MRPS28Q9Y2Q9 187 aaKnown RBP10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 WNK2Q9Y3S1 2297 aa10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 SONP18583 2426 aaKnown RBP10.01□□□□□ -0.81
CSNK1E-213ENST00000495232 TRBV23-1A0A0A0MS06 115 aa10□□□□□ -0.81
CSNK1E-213ENST00000495232 K7N7A8 449 aa10□□□□□ -0.81
CSNK1E-213ENST00000495232 SIRPB1O00241 398 aa10□□□□□ -0.81
CSNK1E-213ENST00000495232 DEGS1O15121 323 aa10□□□□□ -0.81
CSNK1E-213ENST00000495232 TOX4O94842 621 aa10□□□□□ -0.81
CSNK1E-213ENST00000495232 FAM157CP0CG43 387 aa10□□□□□ -0.81
CSNK1E-213ENST00000495232 ADRA2CP18825 462 aa10□□□□□ -0.81
CSNK1E-213ENST00000495232 GALP22466 123 aa10□□□□□ -0.81
CSNK1E-213ENST00000495232 MYL9P24844 172 aa10□□□□□ -0.81
CSNK1E-213ENST00000495232 RANBP1P43487 201 aa10□□□□□ -0.81
CSNK1E-213ENST00000495232 PSMD7P51665 324 aa10□□□□□ -0.81
CSNK1E-213ENST00000495232 BLMHQ13867 455 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms