RNA–Protein interactions for RNA: ENST00000494993.1

HDDC3-203, Transcript of HD domain containing 3, humanhuman

TSL 2

Gene HDDC3, Length 1,220 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-203ENST00000494993 SLC34A1Q06495 639 aa17.74■□□□□ 0.43
HDDC3-203ENST00000494993 GRK1Q15835 563 aa17.74■□□□□ 0.43
HDDC3-203ENST00000494993 Q8IYB0 196 aa17.74■□□□□ 0.43
HDDC3-203ENST00000494993 OR52N4Q8NGI2 321 aa17.74■□□□□ 0.43
HDDC3-203ENST00000494993 NDNFQ8TB73 568 aa17.74■□□□□ 0.43
HDDC3-203ENST00000494993 ADI1Q9BV57 179 aa17.74■□□□□ 0.43
HDDC3-203ENST00000494993 CHST6Q9GZX3 395 aa17.74■□□□□ 0.43
HDDC3-203ENST00000494993 NECAP2Q9NVZ3 263 aa17.74■□□□□ 0.43
HDDC3-203ENST00000494993 IL36RNQ9UBH0 155 aa17.74■□□□□ 0.43
HDDC3-203ENST00000494993 G3V2T6 193 aa17.73■□□□□ 0.43
HDDC3-203ENST00000494993 SULT1C4O75897 302 aa17.73■□□□□ 0.43
HDDC3-203ENST00000494993 SERPINA3P01011 423 aa17.73■□□□□ 0.43
HDDC3-203ENST00000494993 ALDOBP05062 364 aa17.73■□□□□ 0.43
HDDC3-203ENST00000494993 GABRR1P24046 479 aa17.73■□□□□ 0.43
HDDC3-203ENST00000494993 AZGP1P25311 298 aaKnown RBP17.73■□□□□ 0.43
HDDC3-203ENST00000494993 HTR1FP30939 366 aa17.73■□□□□ 0.43
HDDC3-203ENST00000494993 ZNF91Q05481 1191 aa17.73■□□□□ 0.43
HDDC3-203ENST00000494993 ATP6AP1Q15904 470 aa17.73■□□□□ 0.43
HDDC3-203ENST00000494993 TMEM95Q3KNT9 176 aa17.73■□□□□ 0.43
HDDC3-203ENST00000494993 ENTHD1Q8IYW4 607 aa17.73■□□□□ 0.43
HDDC3-203ENST00000494993 SGCDQ92629 289 aa17.73■□□□□ 0.43
HDDC3-203ENST00000494993 PHF21AQ96BD5 680 aa17.73■□□□□ 0.43
HDDC3-203ENST00000494993 C10orf35Q96D05 121 aa17.73■□□□□ 0.43
HDDC3-203ENST00000494993 CLEC7AQ9BXN2 247 aa17.73■□□□□ 0.43
HDDC3-203ENST00000494993 GABARAPL1Q9H0R8 117 aa17.73■□□□□ 0.43
HDDC3-203ENST00000494993 TMEM133Q9H2Q1 129 aa17.73■□□□□ 0.43
HDDC3-203ENST00000494993 ZNF281Q9Y2X9 895 aa17.73■□□□□ 0.43
HDDC3-203ENST00000494993 LOC107986453A0A1B0GWG9 222 aa17.72■□□□□ 0.43
HDDC3-203ENST00000494993 FAM90A22PA8MWA6 464 aa17.72■□□□□ 0.43
HDDC3-203ENST00000494993 PSPNO60542 156 aa17.72■□□□□ 0.43
HDDC3-203ENST00000494993 APOL3O95236 402 aa17.72■□□□□ 0.43
HDDC3-203ENST00000494993 PRSS35Q8N3Z0 413 aa17.72■□□□□ 0.43
HDDC3-203ENST00000494993 OR10H4Q8NGA5 316 aa17.72■□□□□ 0.43
HDDC3-203ENST00000494993 PP6455Q8WZ26 134 aa17.72■□□□□ 0.43
HDDC3-203ENST00000494993 RBFOX1Q9NWB1 397 aaKnown RBP17.72■□□□□ 0.43
HDDC3-203ENST00000494993 AURKAIP1Q9NWT8 199 aaPredicted RBP17.72■□□□□ 0.43
HDDC3-203ENST00000494993 ENOPH1Q9UHY7 261 aa17.72■□□□□ 0.43
HDDC3-203ENST00000494993 TRBV2A0A0J9YWF9 115 aa17.71■□□□□ 0.43
HDDC3-203ENST00000494993 DUSP1P28562 367 aa17.71■□□□□ 0.43
HDDC3-203ENST00000494993 NPBWR2P48146 333 aa17.71■□□□□ 0.43
HDDC3-203ENST00000494993 RBP2P50120 134 aa17.71■□□□□ 0.43
HDDC3-203ENST00000494993 ATP1B3P54709 279 aa17.71■□□□□ 0.43
HDDC3-203ENST00000494993 LOXL3P58215 753 aa17.71■□□□□ 0.43
HDDC3-203ENST00000494993 ZBTB49Q6ZSB9 765 aa17.71■□□□□ 0.43
HDDC3-203ENST00000494993 ZDHHC13Q8IUH4 622 aa17.71■□□□□ 0.43
HDDC3-203ENST00000494993 FAM58AQ8N1B3 248 aa17.71■□□□□ 0.43
HDDC3-203ENST00000494993 DNAAF1Q8NEP3 725 aa17.71■□□□□ 0.43
HDDC3-203ENST00000494993 OCSTAMPQ9BR26 566 aa17.71■□□□□ 0.43
HDDC3-203ENST00000494993 MGST3O14880 152 aa17.7■□□□□ 0.42
HDDC3-203ENST00000494993 MMP23AO75900 390 aa17.7■□□□□ 0.42
HDDC3-203ENST00000494993 ALX3O95076 343 aa17.7■□□□□ 0.42
HDDC3-203ENST00000494993 CYB5AP00167 134 aa17.7■□□□□ 0.42
HDDC3-203ENST00000494993 UBCP0CG48 685 aaKnown RBP17.7■□□□□ 0.42
HDDC3-203ENST00000494993 BCL3P20749 454 aa17.7■□□□□ 0.42
HDDC3-203ENST00000494993 HTR1DP28221 377 aa17.7■□□□□ 0.42
HDDC3-203ENST00000494993 KIR3DL2P43630 455 aa17.7■□□□□ 0.42
HDDC3-203ENST00000494993 POU3F4P49335 361 aa17.7■□□□□ 0.42
HDDC3-203ENST00000494993 IL18R1Q13478 541 aa17.7■□□□□ 0.42
HDDC3-203ENST00000494993 ZNF146Q15072 292 aa17.7■□□□□ 0.42
HDDC3-203ENST00000494993 OR4P4Q8NGL7 312 aa17.7■□□□□ 0.42
HDDC3-203ENST00000494993 CIB1Q99828 191 aa17.7■□□□□ 0.42
HDDC3-203ENST00000494993 UBE2J1Q9Y385 318 aaPredicted RBP17.7■□□□□ 0.42
HDDC3-203ENST00000494993 H3BUI4 141 aa17.69■□□□□ 0.42
HDDC3-203ENST00000494993 ENTPD6O75354 484 aa17.69■□□□□ 0.42
HDDC3-203ENST00000494993 PRKACAP17612 351 aa17.69■□□□□ 0.42
HDDC3-203ENST00000494993 ERP29P30040 261 aaKnown RBP17.69■□□□□ 0.42
HDDC3-203ENST00000494993 OR3A1P47881 315 aa17.69■□□□□ 0.42
HDDC3-203ENST00000494993 P2RX3P56373 397 aa17.69■□□□□ 0.42
HDDC3-203ENST00000494993 ISL1P61371 349 aa17.69■□□□□ 0.42
HDDC3-203ENST00000494993 CD83Q01151 205 aa17.69■□□□□ 0.42
HDDC3-203ENST00000494993 SPIN3Q5JUX0 258 aa17.69■□□□□ 0.42
HDDC3-203ENST00000494993 C16orf82Q7Z2V1 217 aa17.69■□□□□ 0.42
HDDC3-203ENST00000494993 FAM220AQ7Z4H9 259 aa17.69■□□□□ 0.42
HDDC3-203ENST00000494993 TRAPPC6BQ86SZ2 158 aa17.69■□□□□ 0.42
HDDC3-203ENST00000494993 RDH10Q8IZV5 341 aa17.69■□□□□ 0.42
HDDC3-203ENST00000494993 OR5AU1Q8NGC0 362 aa17.69■□□□□ 0.42
HDDC3-203ENST00000494993 ADAT3Q96EY9 351 aaPredicted RBP17.69■□□□□ 0.42
HDDC3-203ENST00000494993 GNG8Q9UK08 70 aa17.69■□□□□ 0.42
HDDC3-203ENST00000494993 IGKV1-9A0A0C4DH69 117 aa17.68■□□□□ 0.42
HDDC3-203ENST00000494993 A0A1W2PRX2 142 aa17.68■□□□□ 0.42
HDDC3-203ENST00000494993 CALCBP10092 127 aa17.68■□□□□ 0.42
HDDC3-203ENST00000494993 FASP25445 335 aa17.68■□□□□ 0.42
HDDC3-203ENST00000494993 ATP6V1E1P36543 226 aa17.68■□□□□ 0.42
HDDC3-203ENST00000494993 POLR2IP36954 125 aaKnown RBP17.68■□□□□ 0.42
HDDC3-203ENST00000494993 SNU13P55769 128 aaKnown RBP17.68■□□□□ 0.42
HDDC3-203ENST00000494993 ZNF85Q03923 595 aa17.68■□□□□ 0.42
HDDC3-203ENST00000494993 TP53I3Q53FA7 332 aa17.68■□□□□ 0.42
HDDC3-203ENST00000494993 FOXB2Q5VYV0 432 aa17.68■□□□□ 0.42
HDDC3-203ENST00000494993 AMIGO2Q86SJ2 522 aa17.68■□□□□ 0.42
HDDC3-203ENST00000494993 WFDC9Q8NEX5 89 aa17.68■□□□□ 0.42
HDDC3-203ENST00000494993 GLS2Q9UI32 602 aa17.68■□□□□ 0.42
HDDC3-203ENST00000494993 SIRPB1O00241 398 aa17.67■□□□□ 0.42
HDDC3-203ENST00000494993 ATF1P18846 271 aa17.67■□□□□ 0.42
HDDC3-203ENST00000494993 CD33P20138 364 aa17.67■□□□□ 0.42
HDDC3-203ENST00000494993 MTCP1P56278 107 aa17.67■□□□□ 0.42
HDDC3-203ENST00000494993 CDC42P60953 191 aa17.67■□□□□ 0.42
HDDC3-203ENST00000494993 TMED1Q13445 227 aa17.67■□□□□ 0.42
HDDC3-203ENST00000494993 OR52W1Q6IF63 320 aa17.67■□□□□ 0.42
HDDC3-203ENST00000494993 BAIAP2L2Q6UXY1 529 aa17.67■□□□□ 0.42
HDDC3-203ENST00000494993 UTS2BQ765I0 119 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms