RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 GDNFP39905 211 aa9.38□□□□□ -0.91
VTI1A-208ENST00000494728 CNN3Q15417 329 aaKnown RBP9.38□□□□□ -0.91
VTI1A-208ENST00000494728 FAM189A2Q15884 450 aa9.38□□□□□ -0.91
VTI1A-208ENST00000494728 SSX2Q16385 188 aa9.38□□□□□ -0.91
VTI1A-208ENST00000494728 UTF1Q5T230 341 aa9.38□□□□□ -0.91
VTI1A-208ENST00000494728 GDPD3Q7L5L3 318 aa9.38□□□□□ -0.91
VTI1A-208ENST00000494728 FAM220AQ7Z4H9 259 aa9.38□□□□□ -0.91
VTI1A-208ENST00000494728 EGFL6Q8IUX8 553 aa9.38□□□□□ -0.91
VTI1A-208ENST00000494728 OR11H6Q8NGC7 330 aa9.38□□□□□ -0.91
VTI1A-208ENST00000494728 WIPF2Q8TF74 440 aaPredicted RBP9.38□□□□□ -0.91
VTI1A-208ENST00000494728 PELI1Q96FA3 418 aa9.38□□□□□ -0.91
VTI1A-208ENST00000494728 HRASLS5Q96KN8 279 aa9.38□□□□□ -0.91
VTI1A-208ENST00000494728 ZNF714Q96N38 554 aa9.38□□□□□ -0.91
VTI1A-208ENST00000494728 NKX3-1Q99801 234 aaPredicted RBP9.38□□□□□ -0.91
VTI1A-208ENST00000494728 IGHV2-26A0A0B4J1V2 119 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 FAM172BPA6NC97 362 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 OR4C45A6NMZ5 311 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 SIRPB1O00241 398 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 SLC16A6O15403 523 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 RBP4P02753 201 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 VSIG10L2P0DP72 767 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 PRKACAP17612 351 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 GABRB1P18505 474 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 ATF1P18846 271 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 GABRR1P24046 479 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 ATP6V1E1P36543 226 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 RBP2P50120 134 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 RASSF2P50749 326 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 LGALS4P56470 323 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 CDC42P60953 191 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 ACTA2P62736 377 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 ACTG2P63267 376 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 ACTC1P68032 377 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 ACTA1P68133 377 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 TMED1Q13445 227 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 KPNB1Q14974 876 aaKnown RBP9.37□□□□□ -0.91
VTI1A-208ENST00000494728 GRK1Q15835 563 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 FDX2Q6P4F2 183 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 UTS2BQ765I0 119 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 FAM58AQ8N1B3 248 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 Q8N2B8 174 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 DNAAF1Q8NEP3 725 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 OR5D18Q8NGL1 313 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 OR13C9Q8NGT0 318 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 OR2T6Q8NHC8 308 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 PP6455Q8WZ26 134 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 RFKQ969G6 155 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 FGGYQ96C11 551 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 LGALS12Q96DT0 336 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 SNX22Q96L94 193 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 ZNF649Q9BS31 505 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 CDCA4Q9BXL8 241 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 NPFFR1Q9GZQ6 430 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 TBL2Q9Y4P3 447 aaKnown RBP9.37□□□□□ -0.91
VTI1A-208ENST00000494728 LINC00312Q9Y6C7 94 aa9.37□□□□□ -0.91
VTI1A-208ENST00000494728 hCG_1809904A0A1W2PP81 198 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 A0A1W2PPE2 198 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 A0A1W2PR64 198 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 A0A1W2PRV1 198 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 ADARB2-AS1A8MUL3 147 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 E9PI62 339 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 ATP5HO75947 161 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 PRB2P02812 416 aaPredicted RBP9.36□□□□□ -0.91
VTI1A-208ENST00000494728 ISG15P05161 165 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 CD28P10747 220 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 MTCP1P56278 107 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 SNRPGP62308 76 aaKnown RBP9.36□□□□□ -0.91
VTI1A-208ENST00000494728 DYNC1I2Q13409 638 aaKnown RBP9.36□□□□□ -0.91
VTI1A-208ENST00000494728 ZNF146Q15072 292 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 BEAN1Q3B7T3 259 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 PRAMEF5Q5TYX0 476 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 LIAT1Q6ZQX7 453 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 Q6ZTK2 550 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 CBR4Q8N4T8 237 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 ZNF676Q8N7Q3 588 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 OR4P4Q8NGL7 312 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 OR13D1Q8NGV5 346 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 C10orf35Q96D05 121 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 C4orf36Q96KX1 117 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 OPALINQ96PE5 141 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 ADI1Q9BV57 179 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 ISG20L2Q9H9L3 353 aaKnown RBP9.36□□□□□ -0.91
VTI1A-208ENST00000494728 HMG20AQ9NP66 347 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 RAB18Q9NP72 206 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 IMPAD1Q9NX62 359 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 MYRFQ9Y2G1 1151 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 HILPDAQ9Y5L2 63 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 SESN1Q9Y6P5 492 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 DNAH9Q9NYC9 4486 aa9.36□□□□□ -0.91
VTI1A-208ENST00000494728 hADV38S2A0JD32 116 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 J3QLW9 94 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 CIB2O75838 187 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 OR2H2O95918 312 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 HTR1AP08908 422 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 ZNF19P17023 458 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 ZNF20P17024 532 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 CD24P25063 80 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 ALDH3A2P51648 485 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 ATP1B3P54709 279 aa9.35□□□□□ -0.91
VTI1A-208ENST00000494728 P2RX3P56373 397 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms