RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 SIRPB1O00241 398 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 TOR1AO14656 332 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 PRKYO43930 277 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 FAM107AO95990 144 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 SERPINA3P01011 423 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 IGLV3-1P01715 115 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 PRKACAP17612 351 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 CALB2P22676 271 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 ATP6V1E1P36543 226 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 CRISP1P54107 249 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 MEF2CQ06413 473 aaPredicted RBP7.72□□□□□ -1.17
UBR4-216ENST00000494503 SCN1BQ07699 218 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 MEPCEQ7L2J0 689 aaKnown RBP7.72□□□□□ -1.17
UBR4-216ENST00000494503 ELMOD2Q8IZ81 293 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 TCEANCQ8N8B7 351 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 OR14K1Q8NGZ2 314 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 ITFG2Q969R8 447 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 RCC1LQ96I51 464 aaKnown RBP7.72□□□□□ -1.17
UBR4-216ENST00000494503 SNX22Q96L94 193 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 NEK6Q9HC98 313 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 KRT84Q9NSB2 600 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 RBFOX1Q9NWB1 397 aaKnown RBP7.72□□□□□ -1.17
UBR4-216ENST00000494503 MTCH1Q9NZJ7 389 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 ZKSCAN7Q9P0L1 754 aaPredicted RBP7.72□□□□□ -1.17
UBR4-216ENST00000494503 IL36RNQ9UBH0 155 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 LINC00312Q9Y6C7 94 aa7.72□□□□□ -1.17
UBR4-216ENST00000494503 TRGV10A0A0A0MS01 117 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 WI2-2373I1.2A0A1W2PRP0 233 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 NUDT19A8MXV4 375 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 ZNF737O75373 536 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 APOL3O95236 402 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 CCDC159P0C7I6 412 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 BCL3P20749 454 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 MPZP25189 248 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 DYNLT3P51808 116 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 RAB25P57735 213 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 CD83Q01151 205 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 FLOT2Q14254 428 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 KPNB1Q14974 876 aaKnown RBP7.71□□□□□ -1.18
UBR4-216ENST00000494503 PTGES3Q15185 160 aaKnown RBP7.71□□□□□ -1.18
UBR4-216ENST00000494503 TMEM42Q69YG0 159 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 C10orf99Q6UWK7 81 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 BAIAP2L2Q6UXY1 529 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 TCF23Q7RTU1 214 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 FAM220AQ7Z4H9 259 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 ENTHD1Q8IYW4 607 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 ABHD12Q8N2K0 398 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 OR10H4Q8NGA5 316 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 ZNF596Q8TC21 504 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 IL4I1Q96RQ9 567 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 OCSTAMPQ9BR26 566 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 GAL3ST2Q9H3Q3 398 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 ADGRL4Q9HBW9 690 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 CLN6Q9NWW5 311 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 DPM3Q9P2X0 92 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 MRM2Q9UI43 246 aaKnown RBP7.71□□□□□ -1.18
UBR4-216ENST00000494503 GSTK1Q9Y2Q3 226 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 PCDHGB5Q9Y5G0 923 aa7.71□□□□□ -1.18
UBR4-216ENST00000494503 IGKV1-27A0A075B6S5 117 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 A0A1B0GTI1 187 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 AQP12BA6NM10 295 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 LEUTXA8MZ59 168 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 FKBP6O75344 327 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 SRSF10O75494 262 aaKnown RBP7.7□□□□□ -1.18
UBR4-216ENST00000494503 MMP23AO75900 390 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 DUS4LO95620 317 aaKnown RBP7.7□□□□□ -1.18
UBR4-216ENST00000494503 ZNF44P15621 663 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 ZNF20P17024 532 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 CDK2P24941 298 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 NFYBP25208 207 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 CEACAM3P40198 252 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 MNDAP41218 407 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 OR3A4PP47883 348 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 FUT6P51993 359 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 ATP1B3P54709 279 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 MTCP1P56278 107 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 P2RX3P56373 397 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 KRTAP10-11P60412 298 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 ERVK11-1P61568 191 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 BNIP1Q12981 228 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 HES1Q14469 280 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 UBE2V2Q15819 145 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 OR52W1Q6IF63 320 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 KRT74Q7RTS7 529 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 C16orf82Q7Z2V1 217 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 AQP12AQ8IXF9 295 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 Q8IYB0 196 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 FAM58AQ8N1B3 248 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 OR51D1Q8NGF3 324 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 OR52N4Q8NGI2 321 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 OR4P4Q8NGL7 312 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 WIPF2Q8TF74 440 aaPredicted RBP7.7□□□□□ -1.18
UBR4-216ENST00000494503 RFT1Q96AA3 541 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 MNTQ99583 582 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 LIN7BQ9HAP6 207 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 EXOSC4Q9NPD3 245 aaKnown RBP7.7□□□□□ -1.18
UBR4-216ENST00000494503 DNAJB9Q9UBS3 223 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 GNG8Q9UK08 70 aa7.7□□□□□ -1.18
UBR4-216ENST00000494503 LOC107986453A0A1B0GWG9 222 aa7.69□□□□□ -1.18
UBR4-216ENST00000494503 PSMB11A5LHX3 300 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms