RNA–Protein interactions for RNA: ENST00000493815.5

PDLIM7-208, Transcript of PDZ and LIM domain 7, humanhuman

TSL 1 (best)

Gene PDLIM7, Length 1,686 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-208ENST00000493815 AIREO43918 545 aa14.86□□□□□ -0.03
PDLIM7-208ENST00000493815 MSMBP08118 114 aa14.86□□□□□ -0.03
PDLIM7-208ENST00000493815 SCN1BQ07699 218 aa14.86□□□□□ -0.03
PDLIM7-208ENST00000493815 PIGYQ3MUY2 71 aa14.86□□□□□ -0.03
PDLIM7-208ENST00000493815 WDR25Q64LD2 544 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-208ENST00000493815 CLEC9AQ6UXN8 241 aa14.86□□□□□ -0.03
PDLIM7-208ENST00000493815 NR2C2APQ86WQ0 139 aa14.86□□□□□ -0.03
PDLIM7-208ENST00000493815 ST8SIA4Q92187 359 aa14.86□□□□□ -0.03
PDLIM7-208ENST00000493815 C1orf159Q96HA4 380 aa14.86□□□□□ -0.03
PDLIM7-208ENST00000493815 C1orf147Q96MC9 270 aaPredicted RBP14.86□□□□□ -0.03
PDLIM7-208ENST00000493815 KAAG1Q9UBP8 84 aa14.86□□□□□ -0.03
PDLIM7-208ENST00000493815 MALRD1Q5VYJ5 2156 aa14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 TEP1Q99973 2627 aaKnown RBP14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 KIAA1324LA8MWY0 1029 aaPredicted RBP14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 SIGLEC5O15389 551 aa14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 HAND1O96004 215 aa14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 ALDH3B2P48448 385 aa14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 CLDN12P56749 244 aa14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 FGF12P61328 243 aa14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 IL13RA1P78552 427 aa14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 COL10A1Q03692 680 aa14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 P2RY14Q15391 338 aa14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 TMEM185AQ8NFB2 350 aa14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 FOXRED1Q96CU9 486 aaPredicted RBP14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 SDSLQ96GA7 329 aa14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 KCTD7Q96MP8 289 aa14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 NAA50Q9GZZ1 169 aaKnown RBP14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 PLGRKTQ9HBL7 147 aa14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 MMP26Q9NRE1 261 aa14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 ZNF581Q9P0T4 197 aa14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 V9GY05 133 aa14.85□□□□□ -0.03
PDLIM7-208ENST00000493815 CSTBP04080 98 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 CLEC2LP0C7M8 214 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 HTR2CP28335 458 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 SDC2P34741 201 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 MTNR1BP49286 362 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 CAV3P56539 151 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 MXD1Q05195 221 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 C1orf100Q5SVJ3 147 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 HES5Q5TA89 166 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 ELP2Q6IA86 826 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 OR10K2Q6IF99 312 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 FIP1L1Q6UN15 594 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 BIVMQ86UB2 503 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 TMEM104Q8NE00 496 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 FAM46BQ96A09 425 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 BANF2Q9H503 90 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 HIF1ANQ9NWT6 349 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 SIRPB1O00241 398 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 NDUFB3O43676 98 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 CD5LO43866 347 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 FOXH1O75593 365 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 CD37P11049 281 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 RAB3BP20337 219 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 CAPZA1P52907 286 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 ZNF146Q15072 292 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 ASCC1Q8N9N2 400 aaKnown RBP14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 TBC1D15Q8TC07 691 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 MED30Q96HR3 178 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 DNTTIP1Q9H147 329 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 IL36GQ9NZH8 169 aa14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 SLC25A10Q9UBX3 287 aaPredicted RBP14.84□□□□□ -0.03
PDLIM7-208ENST00000493815 C22orf46C9J442 243 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 SLC17A2O00624 439 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 PDCD5O14737 125 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 SLC22A1O15245 554 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 CRTAPO75718 401 aaPredicted RBP14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 OR2H2O95918 312 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 NDUFB7P17568 137 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 TIMM50Q3ZCQ8 353 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 LRRC10Q5BKY1 277 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 SPIN3Q5JUX0 258 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 GPR107Q5VW38 600 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 OSR2Q8N2R0 312 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 Q8NFD4 153 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 OR6M1Q8NGM8 313 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 SLC25A28Q96A46 364 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 TMEM186Q96B77 213 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 CHST6Q9GZX3 395 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 RHOFQ9HBH0 211 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 YAE1D1Q9NRH1 226 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 ST3GAL6Q9Y274 331 aa14.83□□□□□ -0.04
PDLIM7-208ENST00000493815 A0A0B4J203 849 aa14.82□□□□□ -0.04
PDLIM7-208ENST00000493815 TMEM82A0PJX8 343 aa14.82□□□□□ -0.04
PDLIM7-208ENST00000493815 A8MXK9 166 aa14.82□□□□□ -0.04
PDLIM7-208ENST00000493815 SH2D1BO14796 132 aa14.82□□□□□ -0.04
PDLIM7-208ENST00000493815 PSPNO60542 156 aa14.82□□□□□ -0.04
PDLIM7-208ENST00000493815 RAB11BQ15907 218 aa14.82□□□□□ -0.04
PDLIM7-208ENST00000493815 FAM166AQ6J272 317 aa14.82□□□□□ -0.04
PDLIM7-208ENST00000493815 SLC16A12Q6ZSM3 486 aa14.82□□□□□ -0.04
PDLIM7-208ENST00000493815 BTN2A1Q7KYR7 527 aa14.82□□□□□ -0.04
PDLIM7-208ENST00000493815 GPR141Q7Z602 305 aa14.82□□□□□ -0.04
PDLIM7-208ENST00000493815 ZNF561Q8N587 486 aa14.82□□□□□ -0.04
PDLIM7-208ENST00000493815 H1FXQ92522 213 aaKnown RBP14.82□□□□□ -0.04
PDLIM7-208ENST00000493815 SCOCQ9UIL1 159 aa14.82□□□□□ -0.04
PDLIM7-208ENST00000493815 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP14.82□□□□□ -0.042e-7■■■□□ 16.9
PDLIM7-208ENST00000493815 LOC105371242A0A075B767 164 aa14.81□□□□□ -0.04
PDLIM7-208ENST00000493815 A0A0G2JK05 382 aa14.81□□□□□ -0.04
PDLIM7-208ENST00000493815 HSPB6O14558 160 aa14.81□□□□□ -0.04
PDLIM7-208ENST00000493815 GEMIN2O14893 280 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms