RNA–Protein interactions for RNA: ENST00000493522.6

CTSA-209, Transcript of cathepsin A, humanhuman

TSL 2

Gene CTSA, Length 901 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-209ENST00000493522 ZNF841Q6ZN19 808 aa9.62□□□□□ -0.87
CTSA-209ENST00000493522 ZNF788Q6ZQV5 615 aa9.62□□□□□ -0.87
CTSA-209ENST00000493522 SAXO1Q8IYX7 474 aa9.62□□□□□ -0.87
CTSA-209ENST00000493522 FAM58AQ8N1B3 248 aa9.62□□□□□ -0.87
CTSA-209ENST00000493522 FGFRL1Q8N441 504 aa9.62□□□□□ -0.87
CTSA-209ENST00000493522 NKAIN3Q8N8D7 197 aa9.62□□□□□ -0.87
CTSA-209ENST00000493522 ZSCAN4Q8NAM6 433 aaPredicted RBP9.62□□□□□ -0.87
CTSA-209ENST00000493522 TSPAN14Q8NG11 270 aa9.62□□□□□ -0.87
CTSA-209ENST00000493522 S100A13Q99584 98 aa9.62□□□□□ -0.87
CTSA-209ENST00000493522 SLITRK2Q9H156 845 aa9.62□□□□□ -0.87
CTSA-209ENST00000493522 IL36RNQ9UBH0 155 aa9.62□□□□□ -0.87
CTSA-209ENST00000493522 SF3B6Q9Y3B4 125 aaKnown RBP9.62□□□□□ -0.87
CTSA-209ENST00000493522 A0A087WXM4 84 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 SIGLEC5O15389 551 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 SC5DO75845 299 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 ARL6IP5O75915 188 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 CDRT1O95170 752 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 SFTPBP07988 381 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 UCHL1P09936 223 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 NDUFB7P17568 137 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 FABP5Q01469 135 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 RSU1Q15404 277 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 DGUOKQ16854 277 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 ATPAF1Q5TC12 328 aaPredicted RBP9.61□□□□□ -0.87
CTSA-209ENST00000493522 FAHD2BQ6P2I3 314 aaPredicted RBP9.61□□□□□ -0.87
CTSA-209ENST00000493522 TMEM91Q6ZNR0 172 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 CD177Q8N6Q3 437 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 ASCC1Q8N9N2 400 aaKnown RBP9.61□□□□□ -0.87
CTSA-209ENST00000493522 PXT1Q8NFP0 134 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 OR10K1Q8NGX5 313 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 H1FXQ92522 213 aaKnown RBP9.61□□□□□ -0.87
CTSA-209ENST00000493522 PHYHIPQ92561 330 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 MUL1Q969V5 352 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 FAHD2AQ96GK7 314 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 MED30Q96HR3 178 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 ZNF696Q9H7X3 374 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 MMP26Q9NRE1 261 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 SLC25A10Q9UBX3 287 aaPredicted RBP9.61□□□□□ -0.87
CTSA-209ENST00000493522 ING4Q9UNL4 249 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 TENM1Q9UKZ4 2725 aa9.61□□□□□ -0.87
CTSA-209ENST00000493522 LOC105371242A0A075B767 164 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 IGHV2-70DA0A0C4DH43 119 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 MEGF11A6BM72 1044 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 C22orf46C9J442 243 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 ENSAO43768 121 aaKnown RBP9.6□□□□□ -0.87
CTSA-209ENST00000493522 FCN3O75636 299 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 HTR3BO95264 441 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 HAND1O96004 215 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 SERPINA2P20848 420 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 CALRP27797 417 aaKnown RBP9.6□□□□□ -0.87
CTSA-209ENST00000493522 DUSP1P28562 367 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 PRDX2P32119 198 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 PTGFRP43088 359 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 MTNR1BP49286 362 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 COL10A1Q03692 680 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 SPIN3Q5JUX0 258 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 CD276Q5ZPR3 534 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 AWAT2Q6E213 333 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 BTNL3Q6UXE8 466 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 C1QL2Q7Z5L3 287 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 ZNF561Q8N587 486 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 ZNRF1Q8ND25 227 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 SDSLQ96GA7 329 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 NUDT16L1Q9BRJ7 211 aaKnown RBP9.6□□□□□ -0.87
CTSA-209ENST00000493522 PPIL3Q9H2H8 161 aaKnown RBP9.6□□□□□ -0.87
CTSA-209ENST00000493522 HMG20AQ9NP66 347 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 EXOSC4Q9NPD3 245 aaKnown RBP9.6□□□□□ -0.87
CTSA-209ENST00000493522 GLS2Q9UI32 602 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 GSTK1Q9Y2Q3 226 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 MRPS28Q9Y2Q9 187 aaKnown RBP9.6□□□□□ -0.87
CTSA-209ENST00000493522 POLR3KQ9Y2Y1 108 aaPredicted RBP9.6□□□□□ -0.87
CTSA-209ENST00000493522 MAB21L2Q9Y586 359 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 INSIG2Q9Y5U4 225 aa9.6□□□□□ -0.87
CTSA-209ENST00000493522 A0A0A6YYJ9 748 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 PPIAL4CA0A0B4J2A2 164 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 TRDV1A0A1B0GX56 115 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 J3QLI3 93 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 SIRPB1O00241 398 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 ECDO95905 644 aaPredicted RBP9.59□□□□□ -0.87
CTSA-209ENST00000493522 CSTBP04080 98 aaKnown RBP9.59□□□□□ -0.87
CTSA-209ENST00000493522 CHRM2P08172 466 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 ADRA2CP18825 462 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 SRMP19623 302 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 GATA3P23771 443 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 MYL9P24844 172 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 CFPP27918 469 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 BMXP51813 675 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 GP2P55259 537 aaKnown RBP9.59□□□□□ -0.87
CTSA-209ENST00000493522 FGF12P61328 243 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 SCGB2A2Q13296 93 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 SLC22A6Q4U2R8 563 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 SYT6Q5T7P8 510 aaPredicted RBP9.59□□□□□ -0.87
CTSA-209ENST00000493522 GLT8D1Q68CQ7 371 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 BTN2A1Q7KYR7 527 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 LRRTM1Q86UE6 522 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.59□□□□□ -0.87
CTSA-209ENST00000493522 ZFAND2BQ8WV99 257 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 RAB40AQ8WXH6 277 aa9.59□□□□□ -0.87
CTSA-209ENST00000493522 NR1H4Q96RI1 486 aaPredicted RBP9.59□□□□□ -0.87
CTSA-209ENST00000493522 MRI1Q9BV20 369 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms