RNA–Protein interactions for RNA: ENST00000493455.6

HPS4-216, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 986 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-216ENST00000493455 ZNF44P15621 663 aa13.16□□□□□ -0.3
HPS4-216ENST00000493455 USF1P22415 310 aaPredicted RBP13.16□□□□□ -0.3
HPS4-216ENST00000493455 IL2RGP31785 369 aa13.16□□□□□ -0.3
HPS4-216ENST00000493455 C2orf76Q3KRA6 126 aa13.16□□□□□ -0.3
HPS4-216ENST00000493455 TMEM155Q4W5P6 130 aa13.16□□□□□ -0.3
HPS4-216ENST00000493455 STUMQ69YW2 141 aa13.16□□□□□ -0.3
HPS4-216ENST00000493455 FAM166AQ6J272 317 aa13.16□□□□□ -0.3
HPS4-216ENST00000493455 DCDC5Q6ZRR9 648 aa13.16□□□□□ -0.3
HPS4-216ENST00000493455 CD177Q8N6Q3 437 aa13.16□□□□□ -0.3
HPS4-216ENST00000493455 ASCC1Q8N9N2 400 aaKnown RBP13.16□□□□□ -0.3
HPS4-216ENST00000493455 TMEM185AQ8NFB2 350 aa13.16□□□□□ -0.3
HPS4-216ENST00000493455 LGALS14Q8TCE9 139 aa13.16□□□□□ -0.3
HPS4-216ENST00000493455 TMEM59Q9BXS4 323 aa13.16□□□□□ -0.3
HPS4-216ENST00000493455 RBM38Q9H0Z9 239 aaKnown RBP13.16□□□□□ -0.3
HPS4-216ENST00000493455 IL36GQ9NZH8 169 aa13.16□□□□□ -0.3
HPS4-216ENST00000493455 GLS2Q9UI32 602 aa13.16□□□□□ -0.3
HPS4-216ENST00000493455 METRNQ9UJH8 293 aa13.16□□□□□ -0.3
HPS4-216ENST00000493455 CR1P17927 2039 aa13.16□□□□□ -0.3
HPS4-216ENST00000493455 NOTCH2Q04721 2471 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 TMEM272A0A1B0GTI8 110 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 SMIM31A0A1B0GVY4 71 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 H7C1Q1 480 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 HSPB6O14558 160 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 SH2D1BO14796 132 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 GEMIN2O14893 280 aaKnown RBP13.15□□□□□ -0.3
HPS4-216ENST00000493455 PAHP00439 452 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 PRDX2P32119 198 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 RORCP51449 518 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 BMXP51813 675 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 RBM11P57052 281 aaKnown RBP13.15□□□□□ -0.3
HPS4-216ENST00000493455 SEC61A1P61619 476 aaKnown RBP13.15□□□□□ -0.3
HPS4-216ENST00000493455 COL10A1Q03692 680 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 PLA2G7Q13093 441 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 UNC119Q13432 240 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 TAF9Q16594 264 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 ATAD3CQ5T2N8 411 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 ELP2Q6IA86 826 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 FGFRL1Q8N441 504 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 OR8B3Q8NGG8 313 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 OR51T1Q8NGJ9 327 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 ANGPTL6Q8NI99 470 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 KCNG3Q8TAE7 436 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 SLC25A46Q96AG3 418 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 GAFA1Q96PS6 74 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 OR8B2Q96RD0 313 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 BCL7BQ9BQE9 202 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 DCUN1D5Q9BTE7 237 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 ZNF665Q9H7R5 613 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 ING3Q9NXR8 418 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 ZNF581Q9P0T4 197 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 GHRLQ9UBU3 117 aa13.15□□□□□ -0.3
HPS4-216ENST00000493455 DEGS1O15121 323 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 OR7C1O76099 320 aaPredicted RBP13.14□□□□□ -0.31
HPS4-216ENST00000493455 OR2H2O95918 312 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 CD37P11049 281 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 SPIN3Q5JUX0 258 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 NKAPLQ5M9Q1 402 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 NLRC3Q7RTR2 1065 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 SLC36A1Q7Z2H8 476 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 OR2W3Q7Z3T1 314 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 CROCCP3Q8IVE0 287 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 ZNRF1Q8ND25 227 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 OR5H6Q8NGV6 325 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 ST8SIA4Q92187 359 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 RAB39BQ96DA2 213 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 NEIL1Q96FI4 390 aaPredicted RBP13.14□□□□□ -0.31
HPS4-216ENST00000493455 NICN1Q9BSH3 213 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 BARHL1Q9BZE3 327 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 CHST6Q9GZX3 395 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 PATZ1Q9HBE1 687 aaKnown RBP13.14□□□□□ -0.31
HPS4-216ENST00000493455 RHOFQ9HBH0 211 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 LPAR2Q9HBW0 351 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 CTSZQ9UBR2 303 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 MIOXQ9UGB7 285 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 OR5V1Q9UGF6 321 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 DOCK11Q5JSL3 2073 aa13.14□□□□□ -0.31
HPS4-216ENST00000493455 TMEM14DPA8MWL7 114 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 NDUFB3O43676 98 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 NDUFA2O43678 99 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 IGHV2-5P01817 119 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 HEXAP06865 529 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 NDUFB7P17568 137 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 AMY2BP19961 511 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 SOX6P35712 828 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 RANBP1P43487 201 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 PITPNBP48739 271 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 EFNB2P52799 333 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 IL13RA1P78552 427 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 FOXB2Q5VYV0 432 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 ZNF788Q6ZQV5 615 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 CIARTQ8N365 385 aaPredicted RBP13.13□□□□□ -0.31
HPS4-216ENST00000493455 NEK7Q8TDX7 302 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 H1FXQ92522 213 aaKnown RBP13.13□□□□□ -0.31
HPS4-216ENST00000493455 PPA2Q9H2U2 334 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 COMMD3Q9UBI1 195 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 ZNF222Q9UK12 451 aa13.13□□□□□ -0.31
HPS4-216ENST00000493455 FAM157AC9JC47 383 aa13.12□□□□□ -0.31
HPS4-216ENST00000493455 DVL1O14640 695 aa13.12□□□□□ -0.31
HPS4-216ENST00000493455 PHF1O43189 567 aaPredicted RBP13.12□□□□□ -0.31
HPS4-216ENST00000493455 CHRM2P08172 466 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms