RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 ASCC1Q8N9N2 400 aaKnown RBP11.57□□□□□ -0.56
CCM2-217ENST00000492883 IL36RNQ9UBH0 155 aa11.57□□□□□ -0.56
CCM2-217ENST00000492883 OPN4Q9UHM6 478 aa11.57□□□□□ -0.56
CCM2-217ENST00000492883 MAP1AP78559 2803 aaPredicted RBP11.56□□□□□ -0.56
CCM2-217ENST00000492883 MEGF11A6BM72 1044 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 MAGEA13PA6NCF6 341 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 SH2D1BO14796 132 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 RGS9O75916 674 aaPredicted RBP11.56□□□□□ -0.56
CCM2-217ENST00000492883 CDRT1O95170 752 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 HTR3BO95264 441 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 HAND1O96004 215 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 PPIAL4GP0DN37 164 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 PSMB9P28065 219 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 MTNR1BP49286 362 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 BMXP51813 675 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 SCN1BQ07699 218 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 KCTD21Q4G0X4 260 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 SPIN3Q5JUX0 258 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 FAM27D1Q5T7N8 215 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 CDH26Q8IXH8 852 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 OR10K1Q8NGX5 313 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 FCGR1BQ92637 280 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 DACT3Q96B18 629 aaPredicted RBP11.56□□□□□ -0.56
CCM2-217ENST00000492883 NR1H4Q96RI1 486 aaPredicted RBP11.56□□□□□ -0.56
CCM2-217ENST00000492883 DCTN5Q9BTE1 182 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 FAM234AQ9H0X4 552 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 SLITRK2Q9H156 845 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 METTL9Q9H1A3 318 aa11.56□□□□□ -0.56
CCM2-217ENST00000492883 EXOSC4Q9NPD3 245 aaKnown RBP11.56□□□□□ -0.56
CCM2-217ENST00000492883 A0A1W2PQ09 198 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 SC5DO75845 299 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 ARL6IP5O75915 188 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 IFNA2P01563 188 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 CSTBP04080 98 aaKnown RBP11.55□□□□□ -0.56
CCM2-217ENST00000492883 TK1P04183 234 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 UCHL1P09936 223 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 SRMP19623 302 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 GABRR1P24046 479 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 GABRA5P31644 462 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 FGF12P61328 243 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 ARF6P62330 175 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 ZNF146Q15072 292 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 UBE2UQ5VVX9 321 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 METTL11BQ5VVY1 283 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 ELP2Q6IA86 826 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 ASCL4Q6XD76 172 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 TMEM91Q6ZNR0 172 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 NKAIN3Q8N8D7 197 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 LY6G5BQ8NDX9 201 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 OR5D13Q8NGL4 314 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 PPP1R35Q8TAP8 253 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 PHYHIPQ92561 330 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 MUL1Q969V5 352 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 SNX22Q96L94 193 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 PPIL3Q9H2H8 161 aaKnown RBP11.55□□□□□ -0.56
CCM2-217ENST00000492883 SEBOXQ9HB31 216 aaPredicted RBP11.55□□□□□ -0.56
CCM2-217ENST00000492883 PCDHB16Q9NRJ7 776 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 ONECUT1Q9UBC0 465 aa11.55□□□□□ -0.56
CCM2-217ENST00000492883 SF3B6Q9Y3B4 125 aaKnown RBP11.55□□□□□ -0.56
CCM2-217ENST00000492883 CSPG4Q6UVK1 2322 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 K7N7A8 449 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 SIRPB1O00241 398 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 CCRL2O00421 344 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 DEGS1O15121 323 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 ZNF780AO75290 641 aaPredicted RBP11.54□□□□□ -0.56
CCM2-217ENST00000492883 TOX4O94842 621 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 TNFAIP8O95379 198 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 ZNF44P15621 663 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 GP2P55259 537 aaKnown RBP11.54□□□□□ -0.56
CCM2-217ENST00000492883 FABP5Q01469 135 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 SCGB2A2Q13296 93 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 GPR176Q14439 515 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 SSX1Q16384 188 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 SLC22A6Q4U2R8 563 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 GLT8D1Q68CQ7 371 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 GLIPR1L1Q6UWM5 242 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 GDPD3Q7L5L3 318 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 CMTM4Q8IZR5 234 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 FAM185AQ8N0U4 392 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 OR4M1Q8NGD0 313 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 FOXRED1Q96CU9 486 aaPredicted RBP11.54□□□□□ -0.56
CCM2-217ENST00000492883 POM121Q96HA1 1249 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 DMRTB1Q96MA1 342 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 WDFY2Q96P53 400 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 PCGF1Q9BSM1 259 aa11.54□□□□□ -0.56
CCM2-217ENST00000492883 MRPS28Q9Y2Q9 187 aaKnown RBP11.54□□□□□ -0.56
CCM2-217ENST00000492883 ABCA1O95477 2261 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 HIVEP2P31629 2446 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 TRBV23-1A0A0A0MS06 115 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 TMEM82A0PJX8 343 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 ZNF737O75373 536 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 OR2H2O95918 312 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 SERPINA2P20848 420 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 EDDM3BP56851 147 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 RPL31P62899 125 aaKnown RBP11.53□□□□□ -0.56
CCM2-217ENST00000492883 BLMHQ13867 455 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 PDCD1Q15116 288 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 GRK1Q15835 563 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 NEDD8Q15843 81 aa11.53□□□□□ -0.56
CCM2-217ENST00000492883 AWAT2Q6E213 333 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms