RNA–Protein interactions for RNA: ENST00000490398.5

COL9A3-214, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 4

Gene COL9A3, Length 496 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-214ENST00000490398 COMMD4Q9H0A8 199 aa14.82□□□□□ -0.04
COL9A3-214ENST00000490398 BABAM2Q9NXR7 383 aa14.82□□□□□ -0.04
COL9A3-214ENST00000490398 TAS2R4Q9NYW5 299 aa14.82□□□□□ -0.04
COL9A3-214ENST00000490398 EXOSC1Q9Y3B2 195 aaKnown RBP14.82□□□□□ -0.04
COL9A3-214ENST00000490398 NPFFO15130 113 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 OGG1O15527 345 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 PSPNO60542 156 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 HAND1O96004 215 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 CHRM2P08172 466 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 PRKACAP17612 351 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 PAX6P26367 422 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 C21orf33P30042 268 aaPredicted RBP14.81□□□□□ -0.04
COL9A3-214ENST00000490398 DLX6P56179 175 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 ZP1P60852 638 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 ZNF529Q6P280 563 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 TPRX1Q8N7U7 411 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 BPIFB6Q8NFQ5 453 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 AJUBAQ96IF1 538 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 MYCBPQ99417 103 aaPredicted RBP14.81□□□□□ -0.04
COL9A3-214ENST00000490398 CHST6Q9GZX3 395 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 UNKLQ9H9P5 680 aaKnown RBP14.81□□□□□ -0.04
COL9A3-214ENST00000490398 HMG20AQ9NP66 347 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 NOX4Q9NPH5 578 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 PSORS1C1Q9UIG5 152 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 HSPE1-MOB4S4R3N1 261 aa14.81□□□□□ -0.04
COL9A3-214ENST00000490398 SULT1B1O43704 296 aa14.8□□□□□ -0.04
COL9A3-214ENST00000490398 KDM4BO94953 1096 aa14.8□□□□□ -0.04
COL9A3-214ENST00000490398 OCM2P0CE71 109 aa14.8□□□□□ -0.04
COL9A3-214ENST00000490398 OCMP0CE72 109 aaPredicted RBP14.8□□□□□ -0.04
COL9A3-214ENST00000490398 OMGP23515 440 aa14.8□□□□□ -0.04
COL9A3-214ENST00000490398 AQP4P55087 323 aa14.8□□□□□ -0.04
COL9A3-214ENST00000490398 KISS1Q15726 138 aa14.8□□□□□ -0.04
COL9A3-214ENST00000490398 CCDC58Q4VC31 144 aa14.8□□□□□ -0.04
COL9A3-214ENST00000490398 C16orf87Q6PH81 154 aa14.8□□□□□ -0.04
COL9A3-214ENST00000490398 TMPRSS11AQ6ZMR5 421 aa14.8□□□□□ -0.04
COL9A3-214ENST00000490398 SERPINA12Q8IW75 414 aa14.8□□□□□ -0.04
COL9A3-214ENST00000490398 OR4S1Q8NGB4 309 aa14.8□□□□□ -0.04
COL9A3-214ENST00000490398 SGCDQ92629 289 aa14.8□□□□□ -0.04
COL9A3-214ENST00000490398 FAM234AQ9H0X4 552 aa14.8□□□□□ -0.04
COL9A3-214ENST00000490398 METTL8Q9H825 291 aaKnown RBP14.8□□□□□ -0.04
COL9A3-214ENST00000490398 ZMAT3Q9HA38 289 aaKnown RBP14.8□□□□□ -0.04
COL9A3-214ENST00000490398 GSTK1Q9Y2Q3 226 aa14.8□□□□□ -0.04
COL9A3-214ENST00000490398 IRGMA1A4Y4 181 aa14.79□□□□□ -0.04
COL9A3-214ENST00000490398 FAM181BA6NEQ2 426 aa14.79□□□□□ -0.04
COL9A3-214ENST00000490398 SIRPB1O00241 398 aa14.79□□□□□ -0.04
COL9A3-214ENST00000490398 HCKP08631 526 aa14.79□□□□□ -0.04
COL9A3-214ENST00000490398 MYL12AP19105 171 aa14.79□□□□□ -0.04
COL9A3-214ENST00000490398 SAA4P35542 130 aa14.79□□□□□ -0.04
COL9A3-214ENST00000490398 UBE2E1P51965 193 aa14.79□□□□□ -0.04
COL9A3-214ENST00000490398 EDDM3AQ14507 147 aa14.79□□□□□ -0.04
COL9A3-214ENST00000490398 ZNF146Q15072 292 aa14.79□□□□□ -0.04
COL9A3-214ENST00000490398 DMKNQ6E0U4 476 aaPredicted RBP14.79□□□□□ -0.04
COL9A3-214ENST00000490398 FIP1L1Q6UN15 594 aaKnown RBP14.79□□□□□ -0.04
COL9A3-214ENST00000490398 ZNF782Q6ZMW2 699 aaPredicted RBP14.79□□□□□ -0.04
COL9A3-214ENST00000490398 AHSA2Q719I0 299 aa14.79□□□□□ -0.04
COL9A3-214ENST00000490398 LDLRAD3Q86YD5 345 aa14.79□□□□□ -0.04
COL9A3-214ENST00000490398 OR5D14Q8NGL3 314 aa14.79□□□□□ -0.04
COL9A3-214ENST00000490398 OR52N1Q8NH53 320 aa14.79□□□□□ -0.04
COL9A3-214ENST00000490398 SNX22Q96L94 193 aa14.79□□□□□ -0.04
COL9A3-214ENST00000490398 PLCXD1Q9NUJ7 323 aa14.79□□□□□ -0.04
COL9A3-214ENST00000490398 FKBP14Q9NWM8 211 aa14.79□□□□□ -0.04
COL9A3-214ENST00000490398 MEIOCA2RUB1 952 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 EFCAB10A6NFE3 127 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 GABRPO00591 440 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 ALX3O95076 343 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 CYB5AP00167 134 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 RPSAP08865 295 aaKnown RBP14.78□□□□□ -0.04
COL9A3-214ENST00000490398 GABRR1P24046 479 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 COX7A1P24310 79 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 IER3P46695 156 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 OR3A1P47881 315 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 EDDM3BP56851 147 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 RPS11P62280 158 aaKnown RBP eCLIP14.78□□□□□ -0.04
COL9A3-214ENST00000490398 RELBQ01201 579 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 BLMHQ13867 455 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 TAF9Q16594 264 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 Q8IYB0 196 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 OR8H2Q8N162 312 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 GPR148Q8TDV2 347 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 GHSRQ92847 366 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 SMIM19Q96E16 107 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 PGLYRP3Q96LB9 341 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 NEK6Q9HC98 313 aa14.78□□□□□ -0.04
COL9A3-214ENST00000490398 CNOT2Q9NZN8 540 aaKnown RBP14.78□□□□□ -0.04
COL9A3-214ENST00000490398 PNMA8CA0A1B0GUJ8 204 aa14.77□□□□□ -0.05
COL9A3-214ENST00000490398 HAX1O00165 279 aa14.77□□□□□ -0.05
COL9A3-214ENST00000490398 OR2H2O95918 312 aa14.77□□□□□ -0.05
COL9A3-214ENST00000490398 TMEM225BP0DP42 221 aa14.77□□□□□ -0.05
COL9A3-214ENST00000490398 EEF1B2P24534 225 aaKnown RBP14.77□□□□□ -0.05
COL9A3-214ENST00000490398 BMXP51813 675 aa14.77□□□□□ -0.05
COL9A3-214ENST00000490398 GUCA2AQ02747 115 aa14.77□□□□□ -0.05
COL9A3-214ENST00000490398 GRK1Q15835 563 aa14.77□□□□□ -0.05
COL9A3-214ENST00000490398 NCR3LG1Q68D85 454 aa14.77□□□□□ -0.05
COL9A3-214ENST00000490398 Q6P435 159 aa14.77□□□□□ -0.05
COL9A3-214ENST00000490398 OR5D13Q8NGL4 314 aa14.77□□□□□ -0.05
COL9A3-214ENST00000490398 HAVCR2Q8TDQ0 301 aa14.77□□□□□ -0.05
COL9A3-214ENST00000490398 TMEM106AQ96A25 262 aa14.77□□□□□ -0.05
COL9A3-214ENST00000490398 SEBOXQ9HB31 216 aaPredicted RBP14.77□□□□□ -0.05
COL9A3-214ENST00000490398 PAK1IP1Q9NWT1 392 aaPredicted RBP14.77□□□□□ -0.05
COL9A3-214ENST00000490398 ZNRD1Q9P1U0 126 aa14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms