RNA–Protein interactions for RNA: ENST00000490348.1

SRGAP3-208, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 2

Gene SRGAP3, Length 1,554 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-208ENST00000490348 NDUFB3O43676 98 aa11.89□□□□□ -0.51
SRGAP3-208ENST00000490348 ZNF737O75373 536 aa11.89□□□□□ -0.51
SRGAP3-208ENST00000490348 RGS9O75916 674 aaPredicted RBP11.89□□□□□ -0.51
SRGAP3-208ENST00000490348 SRMP19623 302 aa11.89□□□□□ -0.51
SRGAP3-208ENST00000490348 GATA3P23771 443 aa11.89□□□□□ -0.51
SRGAP3-208ENST00000490348 PSMB9P28065 219 aa11.89□□□□□ -0.51
SRGAP3-208ENST00000490348 SNU13P55769 128 aaKnown RBP11.89□□□□□ -0.51
SRGAP3-208ENST00000490348 COL10A1Q03692 680 aa11.89□□□□□ -0.51
SRGAP3-208ENST00000490348 CD200R1LQ6Q8B3 271 aa11.89□□□□□ -0.51
SRGAP3-208ENST00000490348 OR10K1Q8NGX5 313 aa11.89□□□□□ -0.51
SRGAP3-208ENST00000490348 FCGR1BQ92637 280 aa11.89□□□□□ -0.51
SRGAP3-208ENST00000490348 NUDT16L1Q9BRJ7 211 aaKnown RBP11.89□□□□□ -0.51
SRGAP3-208ENST00000490348 FAM192AQ9GZU8 254 aa11.89□□□□□ -0.51
SRGAP3-208ENST00000490348 C7orf69Q9H7B7 122 aa11.89□□□□□ -0.51
SRGAP3-208ENST00000490348 ZNF696Q9H7X3 374 aa11.89□□□□□ -0.51
SRGAP3-208ENST00000490348 RPUSD1Q9UJJ7 312 aaKnown RBP11.89□□□□□ -0.51
SRGAP3-208ENST00000490348 CDC42EP3Q9UKI2 254 aa11.89□□□□□ -0.51
SRGAP3-208ENST00000490348 TMEM82A0PJX8 343 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 J3QLI3 93 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 TNFAIP8O95379 198 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 HAND1O96004 215 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 PSMA1P25786 263 aaKnown RBP11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 CAV3P56539 151 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 TRAM1Q15629 374 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 NEDD8Q15843 81 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 HSD17B12Q53GQ0 312 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 LRRC10Q5BKY1 277 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 SYT6Q5T7P8 510 aaPredicted RBP11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 ELP2Q6IA86 826 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 ZNF561Q8N587 486 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 LY6G5BQ8NDX9 201 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 TMEM185AQ8NFB2 350 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 Q8NFD4 153 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 OR4D6Q8NGJ1 314 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 PHYHIPQ92561 330 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 CPNE2Q96FN4 548 aaPredicted RBP11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 C1orf147Q96MC9 270 aaPredicted RBP11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 GFI1Q99684 422 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 SHARPINQ9H0F6 387 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 GSTK1Q9Y2Q3 226 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 FBN1P35555 2871 aaKnown RBP11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 SHISA3A0PJX4 238 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 K7N7A8 449 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 CCRL2O00421 344 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 ENSAO43768 121 aaKnown RBP11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 PSPNO60542 156 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 TK1P04183 234 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 FGF12P61328 243 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 SPIN3Q5JUX0 258 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 CD276Q5ZPR3 534 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 C17orf107Q6ZR85 190 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 JAGN1Q8N5M9 183 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 TSPAN14Q8NG11 270 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 MUL1Q969V5 352 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 DCTN5Q9BTE1 182 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 BEX2Q9BXY8 128 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 SEBOXQ9HB31 216 aaPredicted RBP11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 RHOFQ9HBH0 211 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 TCF7L1Q9HCS4 588 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 IL36GQ9NZH8 169 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 ZNF581Q9P0T4 197 aa11.88□□□□□ -0.51
SRGAP3-208ENST00000490348 A0A1W2PP11 408 aa11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 ECDO95905 644 aaPredicted RBP11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 FSHBP01225 129 aa11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 CD37P11049 281 aa11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 NDUFB7P17568 137 aa11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 CALRP27797 417 aaKnown RBP11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 MTNR1BP49286 362 aa11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 PDCD1Q15116 288 aa11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 C11orf91Q3C1V1 193 aa11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 PIGYQ3MUY2 71 aa11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 CHRFAM7AQ494W8 412 aa11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 Q6P435 159 aa11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 BTNL3Q6UXE8 466 aa11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 CDH26Q8IXH8 852 aa11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 NKAIN3Q8N8D7 197 aa11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 C8orf46Q8TAG6 207 aa11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 ING4Q9UNL4 249 aa11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 AUP1Q9Y679 476 aa11.87□□□□□ -0.51
SRGAP3-208ENST00000490348 TRIM64CA6NLI5 447 aa11.86□□□□□ -0.51
SRGAP3-208ENST00000490348 GPR37O15354 613 aa11.86□□□□□ -0.51
SRGAP3-208ENST00000490348 OR2H2O95918 312 aa11.86□□□□□ -0.51
SRGAP3-208ENST00000490348 CHRM2P08172 466 aa11.86□□□□□ -0.51
SRGAP3-208ENST00000490348 MMP9P14780 707 aa11.86□□□□□ -0.51
SRGAP3-208ENST00000490348 RSU1Q15404 277 aa11.86□□□□□ -0.51
SRGAP3-208ENST00000490348 KLF17Q5JT82 389 aaPredicted RBP11.86□□□□□ -0.51
SRGAP3-208ENST00000490348 ASCC1Q8N9N2 400 aaKnown RBP11.86□□□□□ -0.51
SRGAP3-208ENST00000490348 PNLDC1Q8NA58 520 aaKnown RBP11.86□□□□□ -0.51
SRGAP3-208ENST00000490348 OR51T1Q8NGJ9 327 aa11.86□□□□□ -0.51
SRGAP3-208ENST00000490348 H1FXQ92522 213 aaKnown RBP11.86□□□□□ -0.51
SRGAP3-208ENST00000490348 UQCC2Q9BRT2 126 aa11.86□□□□□ -0.51
SRGAP3-208ENST00000490348 C19orf12Q9NSK7 152 aa11.86□□□□□ -0.51
SRGAP3-208ENST00000490348 LPAR3Q9UBY5 353 aa11.86□□□□□ -0.51
SRGAP3-208ENST00000490348 MRPS28Q9Y2Q9 187 aaKnown RBP11.86□□□□□ -0.51
SRGAP3-208ENST00000490348 A0A087WXM4 84 aa11.85□□□□□ -0.51
SRGAP3-208ENST00000490348 TRDV1A0A1B0GX56 115 aa11.85□□□□□ -0.51
SRGAP3-208ENST00000490348 MEGF11A6BM72 1044 aa11.85□□□□□ -0.51
SRGAP3-208ENST00000490348 SIRPB1O00241 398 aa11.85□□□□□ -0.51
SRGAP3-208ENST00000490348 OR3A1P47881 315 aa11.85□□□□□ -0.51
SRGAP3-208ENST00000490348 CAPZA1P52907 286 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms