RNA–Protein interactions for RNA: ENST00000490163.5

UBXN4-208, Transcript of UBX domain protein 4, humanhuman

TSL 2

Gene UBXN4, Length 3,394 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN4-208ENST00000490163 DLEU1O43261 78 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 DPM1O60762 260 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 FCN3O75636 299 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 OR2J3O76001 311 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 IFNA17P01571 189 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 RNH1P13489 461 aaKnown RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 FOLR2P14207 255 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 HIST1H1BP16401 226 aaKnown RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF17P17021 662 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 NFYAP23511 347 aaPredicted RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 CDH11P55287 796 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 OR4D2P58180 307 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ELAVL2Q12926 359 aaKnown RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 OR5I1Q13606 314 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 RAB35Q15286 201 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 PYCR3Q53H96 274 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 C5orf47Q569G3 176 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 SIRPB2Q5JXA9 342 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 HACD4Q5VWC8 232 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 LPCAT3Q6P1A2 487 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 WDR74Q6RFH5 385 aaPredicted RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 METTL7BQ6UX53 244 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF730Q6ZMV8 503 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 Q6ZTK2 550 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 SLC16A14Q7RTX9 510 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 DCXRQ7Z4W1 244 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 RIMKLAQ8IXN7 391 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 CDK20Q8IZL9 346 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 LRRC18Q8N456 261 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 CLDN22Q8N7P3 220 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 UBAC2Q8NBM4 344 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 OR10W1Q8NGF6 305 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 OR1S1Q8NH92 325 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 OR5K2Q8NHB8 316 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 LMO3Q8TAP4 145 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 C16orf78Q8WTQ4 265 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ACOT12Q8WYK0 555 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 DYNLL2Q96FJ2 89 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ITCHQ96J02 903 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 GPR21Q99679 349 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 MRPL57Q9BQC6 102 aaKnown RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 NICN1Q9BSH3 213 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 BARHL1Q9BZE3 327 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ACTR3CQ9C0K3 210 aaPredicted RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 FXYD6Q9H0Q3 95 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 UBE2ZQ9H832 354 aaPredicted RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 C1orf123Q9NWV4 160 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 COMMD3Q9UBI1 195 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF629Q9UEG4 869 aaPredicted RBP2.29□□□□□ -2.04
UBXN4-208ENST00000490163 NTNG1Q9Y2I2 539 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 NEUROG3Q9Y4Z2 214 aa2.29□□□□□ -2.04
UBXN4-208ENST00000490163 IGHV3OR16-9A0A0B4J2B5 98 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 TMEM218A2RU14 115 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF670-ZNF695F2Z2N8 137 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 H3BMH7 237 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 K7EMT4 169 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 DCTN6O00399 190 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 ARPC5O15511 151 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 MBTPS2O43462 519 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 OR2T1O43869 369 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 C6orf47O95873 294 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 PTHP01270 115 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 IGHG2P01859 326 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 HLA-DQB1P01920 261 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 CTSLP07711 333 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 UBBP0CG47 229 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 UBCP0CG48 685 aaKnown RBP2.28□□□□□ -2.04
UBXN4-208ENST00000490163 SULT1A3P0DMM9 295 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 SULT1A4P0DMN0 295 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 CXCL3P19876 107 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 PRPS1L1P21108 318 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 KDELR1P24390 212 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 CALCRP30988 508 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 UQCRFS1P47985 274 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 IDH2P48735 452 aaKnown RBP2.28□□□□□ -2.04
UBXN4-208ENST00000490163 PRKXP51817 358 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 HCCSP53701 268 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 LIM2P55344 173 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 RPS27AP62979 156 aaKnown RBP2.28□□□□□ -2.04
UBXN4-208ENST00000490163 UBA52P62987 128 aaKnown RBP2.28□□□□□ -2.04
UBXN4-208ENST00000490163 MRPS10P82664 201 aaKnown RBP2.28□□□□□ -2.04
UBXN4-208ENST00000490163 ST3GAL4Q11206 333 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 GPR176Q14439 515 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF146Q15072 292 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 ZNF726P1Q15940 193 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 GUCA2BQ16661 112 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 TMEM30BQ3MIR4 351 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 ATP6AP1LQ52LC2 224 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 SPIN4Q56A73 249 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 WDR38Q5JTN6 314 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 SPANXN3Q5MJ09 141 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 STEAP4Q687X5 459 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 DOK6Q6PKX4 331 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 PHF13Q86YI8 300 aaPredicted RBP2.28□□□□□ -2.04
UBXN4-208ENST00000490163 LRRC52Q8N7C0 313 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 RELL2Q8NC24 303 aaPredicted RBP2.28□□□□□ -2.04
UBXN4-208ENST00000490163 NECAP1Q8NC96 275 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 OR4C6Q8NH72 309 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 TERB2Q8NHR7 220 aa2.28□□□□□ -2.04
UBXN4-208ENST00000490163 NPRL2Q8WTW4 380 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms