RNA–Protein interactions for RNA: ENST00000489072.5

HMGN1-217, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,014 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-217ENST00000489072 MRPL28Q13084 256 aaKnown RBP20.36■□□□□ 0.85
HMGN1-217ENST00000489072 RCN1Q15293 331 aa20.36■□□□□ 0.85
HMGN1-217ENST00000489072 OR8H2Q8N162 312 aa20.36■□□□□ 0.85
HMGN1-217ENST00000489072 OR4F5Q8NH21 305 aa20.36■□□□□ 0.85
HMGN1-217ENST00000489072 OR5AK2Q8NH90 309 aa20.36■□□□□ 0.85
HMGN1-217ENST00000489072 SNX22Q96L94 193 aa20.36■□□□□ 0.85
HMGN1-217ENST00000489072 ZCCHC4Q9H5U6 513 aa20.36■□□□□ 0.85
HMGN1-217ENST00000489072 CYB5AP00167 134 aa20.35■□□□□ 0.85
HMGN1-217ENST00000489072 PRKACAP17612 351 aa20.35■□□□□ 0.85
HMGN1-217ENST00000489072 ETV1P50549 477 aa20.35■□□□□ 0.85
HMGN1-217ENST00000489072 SNU13P55769 128 aaKnown RBP20.35■□□□□ 0.85
HMGN1-217ENST00000489072 EDDM3BP56851 147 aa20.35■□□□□ 0.85
HMGN1-217ENST00000489072 MIDNQ504T8 468 aa20.35■□□□□ 0.85
HMGN1-217ENST00000489072 TCF23Q7RTU1 214 aa20.35■□□□□ 0.85
HMGN1-217ENST00000489072 OR52N4Q8NGI2 321 aa20.35■□□□□ 0.85
HMGN1-217ENST00000489072 OR5D18Q8NGL1 313 aa20.35■□□□□ 0.85
HMGN1-217ENST00000489072 CYGBQ8WWM9 190 aa20.35■□□□□ 0.85
HMGN1-217ENST00000489072 SLITRK2Q9H156 845 aa20.35■□□□□ 0.85
HMGN1-217ENST00000489072 BEX1Q9HBH7 125 aa20.35■□□□□ 0.85
HMGN1-217ENST00000489072 VPREB3Q9UKI3 123 aa20.35■□□□□ 0.85
HMGN1-217ENST00000489072 C17orf98A8MV24 154 aa20.34■□□□□ 0.85
HMGN1-217ENST00000489072 CCDC159P0C7I6 412 aa20.34■□□□□ 0.85
HMGN1-217ENST00000489072 OCM2P0CE71 109 aa20.34■□□□□ 0.85
HMGN1-217ENST00000489072 OCMP0CE72 109 aaPredicted RBP20.34■□□□□ 0.85
HMGN1-217ENST00000489072 COX7A1P24310 79 aa20.34■□□□□ 0.85
HMGN1-217ENST00000489072 BMXP51813 675 aa20.34■□□□□ 0.85
HMGN1-217ENST00000489072 ZNF146Q15072 292 aa20.34■□□□□ 0.85
HMGN1-217ENST00000489072 XAF1Q6GPH4 301 aa20.34■□□□□ 0.85
HMGN1-217ENST00000489072 ZNF782Q6ZMW2 699 aaPredicted RBP20.34■□□□□ 0.85
HMGN1-217ENST00000489072 GDPD3Q7L5L3 318 aa20.34■□□□□ 0.85
HMGN1-217ENST00000489072 PACRGLQ8N7B6 248 aa20.34■□□□□ 0.85
HMGN1-217ENST00000489072 BEND2Q8NDZ0 799 aa20.34■□□□□ 0.85
HMGN1-217ENST00000489072 RGP1Q92546 391 aaPredicted RBP20.34■□□□□ 0.85
HMGN1-217ENST00000489072 COMMD4Q9H0A8 199 aa20.34■□□□□ 0.85
HMGN1-217ENST00000489072 HEXA-AS1Q9H8Q6 139 aa20.34■□□□□ 0.85
HMGN1-217ENST00000489072 HMG20AQ9NP66 347 aa20.34■□□□□ 0.85
HMGN1-217ENST00000489072 A0A1B0GUS0 222 aa20.33■□□□□ 0.85
HMGN1-217ENST00000489072 PSPNO60542 156 aa20.33■□□□□ 0.85
HMGN1-217ENST00000489072 PAX6P26367 422 aa20.33■□□□□ 0.85
HMGN1-217ENST00000489072 ADARB1P78563 741 aaKnown RBP20.33■□□□□ 0.85
HMGN1-217ENST00000489072 EDDM3AQ14507 147 aa20.33■□□□□ 0.85
HMGN1-217ENST00000489072 GDPGP1Q6ZNW5 385 aa20.33■□□□□ 0.85
HMGN1-217ENST00000489072 PARP16Q8N5Y8 322 aa20.33■□□□□ 0.85
HMGN1-217ENST00000489072 CHST6Q9GZX3 395 aa20.33■□□□□ 0.85
HMGN1-217ENST00000489072 KIAA2026Q5HYC2 2103 aa20.33■□□□□ 0.84
HMGN1-217ENST00000489072 hCG_1809904A0A1W2PP81 198 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 A0A1W2PPE2 198 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 A0A1W2PR64 198 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 A0A1W2PRV1 198 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 CLPSL1A2RUU4 121 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 BTBD17A6NE02 478 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 KDM4BO94953 1096 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 ZNF728P0DKX0 622 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 GABRR1P24046 479 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 DCKP27707 260 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 SRSF4Q08170 494 aaKnown RBP20.32■□□□□ 0.84
HMGN1-217ENST00000489072 SPIN3Q5JUX0 258 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 OR2G6Q5TZ20 316 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 TTC23Q5W5X9 447 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 OLFML2AQ68BL7 652 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 SERPINA12Q8IW75 414 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 TPRX1Q8N7U7 411 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 OR4S1Q8NGB4 309 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 TSEN15Q8WW01 171 aaKnown RBP20.32■□□□□ 0.84
HMGN1-217ENST00000489072 WFDC12Q8WWY7 111 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 C8orf4Q9NR00 106 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 DHDHQ9UQ10 334 aa20.32■□□□□ 0.84
HMGN1-217ENST00000489072 ANKRD65E5RJM6 399 aa20.31■□□□□ 0.84
HMGN1-217ENST00000489072 SULT1B1O43704 296 aa20.31■□□□□ 0.84
HMGN1-217ENST00000489072 ALX3O95076 343 aa20.31■□□□□ 0.84
HMGN1-217ENST00000489072 RPSAP08865 295 aaKnown RBP20.31■□□□□ 0.84
HMGN1-217ENST00000489072 GRK1Q15835 563 aa20.31■□□□□ 0.84
HMGN1-217ENST00000489072 OR5D14Q8NGL3 314 aa20.31■□□□□ 0.84
HMGN1-217ENST00000489072 OR5R1Q8NH85 324 aa20.31■□□□□ 0.84
HMGN1-217ENST00000489072 RPS4Y2Q8TD47 263 aa20.31■□□□□ 0.84
HMGN1-217ENST00000489072 HAVCR2Q8TDQ0 301 aa20.31■□□□□ 0.84
HMGN1-217ENST00000489072 GSTK1Q9Y2Q3 226 aa20.31■□□□□ 0.84
HMGN1-217ENST00000489072 H3BUX3 64 aa20.3■□□□□ 0.84
HMGN1-217ENST00000489072 OR3A1P47881 315 aa20.3■□□□□ 0.84
HMGN1-217ENST00000489072 ZP1P60852 638 aa20.3■□□□□ 0.84
HMGN1-217ENST00000489072 MEF2CQ06413 473 aaPredicted RBP20.3■□□□□ 0.84
HMGN1-217ENST00000489072 IL18R1Q13478 541 aa20.3■□□□□ 0.84
HMGN1-217ENST00000489072 CDK5R1Q15078 307 aa20.3■□□□□ 0.84
HMGN1-217ENST00000489072 PRR31Q5SQ13 230 aa20.3■□□□□ 0.84
HMGN1-217ENST00000489072 ASPHD2Q6ICH7 369 aa20.3■□□□□ 0.84
HMGN1-217ENST00000489072 Q6ZSV7 163 aa20.3■□□□□ 0.84
HMGN1-217ENST00000489072 SAXO1Q8IYX7 474 aa20.3■□□□□ 0.84
HMGN1-217ENST00000489072 DHRSXQ8N5I4 330 aa20.3■□□□□ 0.84
HMGN1-217ENST00000489072 ZSCAN4Q8NAM6 433 aaPredicted RBP20.3■□□□□ 0.84
HMGN1-217ENST00000489072 LINC01006Q8NI28 216 aa20.3■□□□□ 0.84
HMGN1-217ENST00000489072 MEGF9Q9H1U4 602 aa20.3■□□□□ 0.84
HMGN1-217ENST00000489072 NEK6Q9HC98 313 aa20.3■□□□□ 0.84
HMGN1-217ENST00000489072 DIMT1Q9UNQ2 313 aaKnown RBP20.3■□□□□ 0.84
HMGN1-217ENST00000489072 SIRT4Q9Y6E7 314 aaPredicted RBP20.3■□□□□ 0.84
HMGN1-217ENST00000489072 VWFP04275 2813 aa20.29■□□□□ 0.84
HMGN1-217ENST00000489072 SIRPB1O00241 398 aa20.29■□□□□ 0.84
HMGN1-217ENST00000489072 RBP4P02753 201 aa20.29■□□□□ 0.84
HMGN1-217ENST00000489072 HCKP08631 526 aa20.29■□□□□ 0.84
HMGN1-217ENST00000489072 SOX2P48431 317 aa20.29■□□□□ 0.84
HMGN1-217ENST00000489072 KISS1Q15726 138 aa20.29■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms