RNA–Protein interactions for RNA: ENST00000488920.2

CCHCR1-215, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 715 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-215ENST00000488920 CCR9P51686 369 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 MEF2CQ06413 473 aaPredicted RBP9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 PDZK1IP1Q13113 114 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 DYNC1I2Q13409 638 aaKnown RBP9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 GRK1Q15835 563 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 AANATQ16613 207 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 CRIP3Q6Q6R5 217 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 UTS2BQ765I0 119 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 TCF23Q7RTU1 214 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 RNF144BQ7Z419 303 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 Q8IYB0 196 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 ENTHD1Q8IYW4 607 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 ZNF676Q8N7Q3 588 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 OR4S1Q8NGB4 309 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 OR13C3Q8NGS6 347 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 OR13D1Q8NGV5 346 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 SPACA5Q96QH8 159 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 SLC29A1Q99808 456 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 ISG20L2Q9H9L3 353 aaKnown RBP9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 AMBNQ9NP70 447 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 FBLN5Q9UBX5 448 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 HHLA2Q9UM44 414 aa9.67□□□□□ -0.86
CCHCR1-215ENST00000488920 CMYA5Q8N3K9 4069 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 IGKV1-12A0A0C4DH73 117 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 TRBV2A0A0J9YWF9 115 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 hADV38S2A0JD32 116 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 CHST1O43916 411 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 TSPAN15O95858 294 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 IGKV1D-12P01611 117 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 IGHV1-8P0DP01 117 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 DBTP11182 482 aaKnown RBP9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 GABRB1P18505 474 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 PEX2P28328 305 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 KIR2DS4P43632 304 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 ACTA2P62736 377 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 ACTG2P63267 376 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 ZNF91Q05481 1191 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 ALKBH1Q13686 389 aaKnown RBP9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 GALEQ14376 348 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 FAM189A2Q15884 450 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 SSX2Q16385 188 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 LDLRAD2Q5SZI1 272 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 HIST2H2BDQ6DRA6 164 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 LHFPL2Q6ZUX7 228 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 C10orf67Q8IYJ2 551 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 OR5D18Q8NGL1 313 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 OR4C13Q8NGP0 309 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 OR13C9Q8NGT0 318 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 RHOXF1Q8NHV9 184 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 FAM110DQ8TAY7 271 aaPredicted RBP9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 SPSB1Q96BD6 273 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 ZNF714Q96N38 554 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 OPALINQ96PE5 141 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 NKX3-1Q99801 234 aaPredicted RBP9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 C9orf16Q9BUW7 83 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 ALG8Q9BVK2 526 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 MMP27Q9H306 513 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 SEBOXQ9HB31 216 aaPredicted RBP9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 S100A14Q9HCY8 104 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 GLS2Q9UI32 602 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 MYRFQ9Y2G1 1151 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 VWFP04275 2813 aa9.66□□□□□ -0.86
CCHCR1-215ENST00000488920 MEGF11A6BM72 1044 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 VGLL3A8MV65 326 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 ODF3BA8MYP8 253 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 E9PI62 339 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 SIRPB1O00241 398 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 SH2D1BO14796 132 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 RBP4P02753 201 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 OR3A1P47881 315 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 SCN1BQ07699 218 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 ZNF146Q15072 292 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 CCBE1Q6UXH8 406 aaPredicted RBP9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 ZBTB49Q6ZSB9 765 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 C11orf44Q8N8P7 122 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 OR11H6Q8NGC7 330 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 MALSU1Q96EH3 234 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 MRPL48Q96GC5 212 aaKnown RBP9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 Q96MT0 163 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 ZCCHC4Q9H5U6 513 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 NEK6Q9HC98 313 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 HMG20AQ9NP66 347 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 RAB18Q9NP72 206 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 FAM118AQ9NWS6 357 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 FOXJ3Q9UPW0 622 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 GSTK1Q9Y2Q3 226 aa9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 TBL2Q9Y4P3 447 aaKnown RBP9.65□□□□□ -0.86
CCHCR1-215ENST00000488920 LOC100130705A0A1B0GUX0 176 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 MGST3O14880 152 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 MPZL2O60487 215 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 MMP23AO75900 390 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 ZFPL1O95159 310 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 BAG2O95816 211 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 FADS2O95864 444 aaKnown RBP9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 OR2H2O95918 312 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 MT-ND2P03891 347 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 JUNBP17275 347 aaPredicted RBP9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 EFNB2P52799 333 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 P2RX3P56373 397 aa9.64□□□□□ -0.87
CCHCR1-215ENST00000488920 HERPUD1Q15011 391 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms